Pairwise Alignments

Query, 389 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 232 a.a., amino acid ABC transporter permease from Ralstonia solanacearum GMI1000

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 74/211 (35%), Positives = 108/211 (51%), Gaps = 16/211 (7%)

Query: 185 LAAVALALALALAGTVLRRRLGRRDAVSGMSVAAAACGLPVALL-LASGAPLQVEV---- 239
           L  +AL L LA AG VL    G    +  +S          AL+ +  G PL + +    
Sbjct: 24  LGGLALTLLLAAAGLVLALPAGILLGLCRVSPFRLLRWPATALVYVVRGTPLLMVIFWAY 83

Query: 240 ---PELAGFNFSGGTTVSPEFSALLVGLVVNAAAMIAEIVRSGIQAVPGGQWEAARALGL 296
              P L G         + +F+ +L  LVV  AA +AEIVR+GIQA+P GQ E+AR+LGL
Sbjct: 84  FLLPTLTGQR-------TDQFNTMLTALVVFDAAYLAEIVRAGIQALPRGQMESARSLGL 136

Query: 297 PRRRIMRLVVLPQAMRVIVPLLTSSYLNLTKNSSLAVAIGFPDLVSVI-NTSANQTGQVL 355
           P  + MRLV+LPQA+R ++P L +  ++  K +SL   I  P++  V    S +   Q  
Sbjct: 137 PYLQAMRLVLLPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFVAGQISTSVMTQSA 196

Query: 356 ETMAIMMGAYLTVNLAVSAAMNLYNRRLAAR 386
           E   ++  +Y  +   ++    L  RRLAAR
Sbjct: 197 EVYGLLALSYFAMCFGLTRVAFLLERRLAAR 227



 Score = 40.4 bits (93), Expect = 5e-08
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 85  LVGLLNTVKVAVAGGLIATVLGVLLGVARLSGNALLSGLVQGYVELIRSTPLLLQLFF 142
           L GL  T+ +A AG ++A   G+LLG+ R+S   LL       V ++R TPLL+ +F+
Sbjct: 24  LGGLALTLLLAAAGLVLALPAGILLGLCRVSPFRLLRWPATALVYVVRGTPLLMVIFW 81