Pairwise Alignments

Query, 389 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 233 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 73/212 (34%), Positives = 101/212 (47%), Gaps = 17/212 (8%)

Query: 183 WMLAAVALALALALAGTVLRRRLGRRDAVSGMSVAAAACGLPVALL-LASGAPLQVEVPE 241
           W++  V +   ++    VL   LG   AV  +S                   PL V++  
Sbjct: 18  WIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGFTEFFRNTPLLVQI-- 75

Query: 242 LAGFNFSGGTTVSP------------EFSALLVGLVVNAAAMIAEIVRSGIQAVPGGQWE 289
              F + G   V P            EF+A ++ L V  AA IAE +RSGI ++P  Q E
Sbjct: 76  --FFWYFGSDAVLPTAVNQWLYKQNFEFAAGVISLAVYTAAFIAEEIRSGIFSIPRTQLE 133

Query: 290 AARALGLPRRRIMRLVVLPQAMRVIVPLLTSSYLNLTKNSSLAVAIGFPDLVSVINTSAN 349
           A+RA GL   + MR VVLPQA R+IVP L S  LNL KNSSL + IG  +L  +     +
Sbjct: 134 ASRACGLTFLQAMRYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYMARQIES 193

Query: 350 QTGQVLETMAIMMGAYLTVNLAVSAAMNLYNR 381
            T    E   +    YLT++L VS ++  YN+
Sbjct: 194 YTFHGFEAFTVSTLIYLTISLLVSFSITQYNK 225



 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 23/64 (35%), Positives = 37/64 (57%)

Query: 80  YALALLVGLLNTVKVAVAGGLIATVLGVLLGVARLSGNALLSGLVQGYVELIRSTPLLLQ 139
           Y   ++ G++ T +++    ++A  LG L+ V RLS    L     G+ E  R+TPLL+Q
Sbjct: 15  YLQWIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGFTEFFRNTPLLVQ 74

Query: 140 LFFW 143
           +FFW
Sbjct: 75  IFFW 78