Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 321 a.a., sulfonate ABC transporter substrate-binding protein from Pseudomonas sp. BP01

 Score =  136 bits (342), Expect = 8e-37
 Identities = 104/331 (31%), Positives = 155/331 (46%), Gaps = 25/331 (7%)

Query: 12  RRAFLARSLIGAGAAGLATGFDPLAGTLSTARAATQTTAGRNTDTIRLTWGFSGLAFIAK 71
           R  FL R L+   AA ++ G            A TQ  A    +++R+ +   G   + K
Sbjct: 2   RTVFLRRGLVALFAAAVSFG------------AITQAQA----ESLRIGYQKYGTLVLLK 45

Query: 72  ERGELEKTLAKDNIKVEWLGPFPNHAPTLQAVTGGTADFSFGGSTTPALAAIIAGSPLVF 131
            +G LEK LA   ++V+W   FP     L+ +  G+ DF   G T P  A   AG+ L++
Sbjct: 46  AKGTLEKRLADQGVQVQWT-EFPGGPQLLEGLNVGSIDFGVTGETPPVFAQA-AGADLLY 103

Query: 132 SLFLNYTPRTTAIIAKDGSGIDKVTDLVGKSVAVNRSGLGEFLLVAALEKHGVDRSKVNF 191
             +    P + AI+   GS I  V +L GK VA+N+     +LLV ALE  G+  S +  
Sbjct: 104 VAYEPPAPHSEAILVPKGSPIQSVKELKGKKVALNKGSNVHYLLVRALEDAGLKYSDIQP 163

Query: 192 VYLNPPDAAPALASGKVDAWSMWSPGVDIARLEYKAHDIFQEERDLDFQIDFTSYLTRRR 251
           VYL P DA  A   G VDAW +W P    A  + +A  +   +  +D   +   YL  R 
Sbjct: 164 VYLPPADARAAFERGSVDAWVIWDPYQAAAEKQLQARTLRDGKGLVD---NHQFYLATRN 220

Query: 252 FAQENPALIRALNAAFTAEAAWASANTVEAETIVQAKAGYRDEIRDGYIALKRQ-YRLYP 310
           +A ++PA+I  L     A   W+ AN  E    V    G   +I     ++KRQ Y   P
Sbjct: 221 YATQHPAVINTLIEEVRAVGEWSQANPQEVTDQVAPLLGLPADIT--LTSVKRQGYGAAP 278

Query: 311 VSDAAFVGDLQKAADWLVARRILPEPVRVAD 341
           ++    V   QK AD   A +++P+P+ + D
Sbjct: 279 LTPEV-VAAQQKIADAFQALKLIPKPLSIKD 308