Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 328 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  108 bits (269), Expect = 3e-28
 Identities = 82/278 (29%), Positives = 122/278 (43%), Gaps = 6/278 (2%)

Query: 64  SGLAFIAKERGELEKTLAKDNIKVEWLGPFPNHAPTLQAVTGGTADFSFGGSTTPALAAI 123
           S L  I K  G LEK LA    K+ W   F +  P L+A+  G  D S   + T  + A 
Sbjct: 47  STLLTILKANGTLEKLLAPTGAKISW-HEFASGLPLLEALNVGGVDLSADVADTVPVFAQ 105

Query: 124 IAGSPLVFSLFLNYTPRTTAIIAKDGSGIDKVTDLVGKSVAVNRSGLGEFLLVAALEKHG 183
            AG+ L +    + +P   AI+ +  S + K +DL GK +AV ++    +LL+A LEK G
Sbjct: 106 AAGAKLAYVAQESPSPAAQAIVVRADSVLRKASDLKGKKIAVTKAAGVHYLLIATLEKAG 165

Query: 184 VDRSKVNFVYLNPPDAAPALASGKVDAWSMWSPGVDIARLEYKAHDIFQEERDLDFQIDF 243
           +  S V+  YL+P D   A   G VDAW  W P +   + + +   +       D+Q   
Sbjct: 166 LKFSDVDAAYLSPADGRAAFERGSVDAWVTWDPFLAGVQRQSQVRILSDGRGVADYQ--- 222

Query: 244 TSYLTRRRFAQENPALIRALNAAFTAEAAWASANTVEAETIVQAKAGYRDEIRDGYIALK 303
             YL    FAQ  P ++R +         W   +  EA   +    G  D         +
Sbjct: 223 RYYLASASFAQARPEVLRVVFDELQKTGHWVKQHPKEAAAFLAPLWGL-DADTIELANSR 281

Query: 304 RQYRLYPVSDAAFVGDLQKAADWLVARRILPEPVRVAD 341
           R Y +  V   A +G+ Q+ AD   A  +LP  +   D
Sbjct: 282 RSYEVRAVRPEA-LGEQQRIADTFFAAGLLPRKINTND 318