Pairwise Alignments

Query, 295 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

Subject, 260 a.a., ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) from Acidovorax sp. GW101-3H11

 Score =  209 bits (532), Expect = 5e-59
 Identities = 115/270 (42%), Positives = 170/270 (62%), Gaps = 14/270 (5%)

Query: 1   MANEPKKPLLEIAGLTRRFGGLTAVNGLSLTVGQGELVSVIGPNGAGKTTLFNLISGLDV 60
           M  +  + +L++AG+++RFGGL A++ + +T+ +G++  +IGPNGAGKTT FN+I+GL  
Sbjct: 1   MTEKSNEVVLKVAGISKRFGGLQALSDVGITIKRGQVYGLIGPNGAGKTTFFNVITGLYT 60

Query: 61  PDAGSVTFEGRDVTGLSAERLAALGLARSFQHGRVFGNLSVLDNVLVGAHTRLRAVKPRI 120
           PDAG+    G+     +   +A  G+AR+FQ+ R+F  ++ L+NV+VG H R  +     
Sbjct: 61  PDAGTFELAGKPYEPTAVHEVAKAGIARTFQNIRLFAEMTALENVMVGRHIRTGS----- 115

Query: 121 PLVGPLVELALALIRPPSVRAEEERLRAEAKEIVRMFGERLTPRLDKPAHSLSYANRRRV 180
                   L  A+ R    +AEE  +   A+E++   G  +    D  A +LSY ++RR+
Sbjct: 116 -------GLFGAVFRTKGFKAEEAAIAKRAQELLDYVG--IGKFADYKARTLSYGDQRRL 166

Query: 181 EIARALALHPRLLLLDEPTAGMNPTETAEMLEIIRGLKARGLTILLIEHKLDLVMQLSDR 240
           EIARALA  P+L+ LDEP AGMN TE  ++ E+I  ++    TILLIEH + LVM L DR
Sbjct: 167 EIARALATDPQLIALDEPAAGMNATEKVQLRELIDRIRNDNRTILLIEHDVKLVMGLCDR 226

Query: 241 VVVMDHGARIAEGLPAAVASDPAVIEAYLG 270
           V V+D+G +IAEG PA V  +  VIEAYLG
Sbjct: 227 VTVLDYGKQIAEGNPAEVQKNEKVIEAYLG 256