Pairwise Alignments

Query, 400 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 387 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 25/369 (6%)

Query: 27  AALSAEFAPRAAEHDAAASFPFENFDRLAAAGIPALITPKSAGGKGGGLGDALAVVNGIA 86
           A ++AE APRAA+ D    FP + + +    G+  +  P+  GG G G    +  +  I+
Sbjct: 23  AFVNAELAPRAAQIDIDNLFPADMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEIS 82

Query: 87  RGEPSTALVLVLQYVIHNQLWSGPAWPEALRDRIAR--SAATDGALINILRVEPELGTPH 144
           RG  S AL     Y  H+ L           ++  +       G  I  L     +  P+
Sbjct: 83  RGSASVAL----SYGAHSNLCVNQINRNGNHEQKTKYLPKLISGEHIGALA----MSEPN 134

Query: 145 RGGLPATV---ARKVPDGWRLSGTKIYSTGIPALSWLGVWARTENDEPLVG--TWVVSRG 199
            G    ++   A K  D + L+G+K + T  P  +   ++A+T+ ++   G   ++V R 
Sbjct: 135 AGSDVVSMKLRADKRGDKYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERD 194

Query: 200 AGLAEQGIEVRETWNHIGMRASGSHEVVFRDVFVPDDHVGELRPPAGWAAPDAVATAWMA 259
                +G      ++ +GMR S + E+ F DV VP+D++  L    G          +  
Sbjct: 195 W----KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEDNI--LGALNGGVKVLMSGLDYER 248

Query: 260 TLFSGVYDGIARSARDWLVGFLHARKPTGLNGGSLATVPRLQEALGGIEALLLTNRILLR 319
            + SG   GI ++  D +V ++H RK  G + G    +   Q  +  +   L  +R  L 
Sbjct: 249 VVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLI---QGKVADMYTQLNASRAYLY 305

Query: 320 SLSAAVDSGSPPSSSDSLLVKYTVTNNAIDAVARALEITGNPGLSRDHPLERHHRDVLCA 379
           +++ A + G       + ++ Y+    A      A++I G  G   + P  R  RD    
Sbjct: 306 AVAQACERGETTRKDAAGVILYS-AERATQMALDAIQILGGNGYINEFPAGRLLRDAKLY 364

Query: 380 RVHAPQNDM 388
            + A  +++
Sbjct: 365 EIGAGTSEI 373