Pairwise Alignments

Query, 400 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 387 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens FW300-N1B4

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 85/370 (22%), Positives = 158/370 (42%), Gaps = 31/370 (8%)

Query: 29  LSAEFAPRAAEHDAAASFPFENFDRLAAAGIPALITPKSAGGKGGGLGDALAVVNGIARG 88
           ++ E APRAA+ D    FP + + +    G+  +  P+  GG G G    +  +  I+RG
Sbjct: 25  VAKEIAPRAAQIDIDNLFPADLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRG 84

Query: 89  EPSTALVLVLQYVIHNQLWSGPAWPEALRDRIAR--SAATDGALINILRVEPELGTPHRG 146
             S A    L Y  H+ L           ++ ++       G  I  L     +  P+ G
Sbjct: 85  SASVA----LSYGAHSNLCVNQINRNGTHEQKSKYLPKLISGEHIGAL----AMSEPNAG 136

Query: 147 GLPATV---ARKVPDGWRLSGTKIYSTGIPALSWLGVWARTENDEPLVG--TWVVSRGAG 201
               ++   A K  D + L+G+K + T  P  +   ++A+T+ ++   G   ++V R + 
Sbjct: 137 SDVVSMKLRADKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDS- 195

Query: 202 LAEQGIEVRETWNHIGMRASGSHEVVFRDVFVPDDHVGELRPPAGWAAPDAVATAWMATL 261
              +G      ++ +GMR S + E+ F DV VP++++  L    G          +   +
Sbjct: 196 ---KGFSRSNKFDKLGMRGSNTCELFFDDVEVPEENI--LGVLNGGVKVLMSGLDYERVV 250

Query: 262 FSGVYDGIARSARDWLVGFLHARKPTGLNGGSLATVPRLQEALGGIEALLLTNRILLRSL 321
            SG   GI ++  D +V ++H RK  G + G    +   Q  +  +   L  +R  L ++
Sbjct: 251 LSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLI---QGKVADMYTQLNASRAYLYAV 307

Query: 322 SAAVDSGSPPSSSDSLLVKYT---VTNNAIDAVARALEITGNPGLSRDHPLERHHRDVLC 378
           + A + G       + ++ Y+    T  A+DA+    +I G  G   + P  R  RD   
Sbjct: 308 AQACERGETARKDAAGVILYSAECATRMALDAI----QILGGNGYINEFPAGRLLRDAKL 363

Query: 379 ARVHAPQNDM 388
             + A  +++
Sbjct: 364 YEIGAGTSEI 373