Pairwise Alignments

Query, 400 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

 Score = 84.3 bits (207), Expect = 5e-21
 Identities = 98/359 (27%), Positives = 152/359 (42%), Gaps = 31/359 (8%)

Query: 32  EFAPRAAEHDAAASFPFENFDRLAAAGIPALITPKSAGGKGGGLGDALAVVNGIARGEPS 91
           E AP AA+ D    FP +   +    G  +L +P+S GG G    DA  +   +++G  +
Sbjct: 23  ELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLSRLDASIIFEELSKGCTA 82

Query: 92  TALVLVLQYVIHNQL-WSGPAW-PEALRDRIARSAATDGALINILRVEPELGTPHRGGLP 149
           T  +L     IHN   W    W  + LR   +    T   L +    EP  G+       
Sbjct: 83  TTAMLT----IHNMATWMVTTWGTDTLRQAWSEPLTTGQMLASYCLTEPGAGSD--AASL 136

Query: 150 ATVARKVPDGWRLSGTKIYSTGIPALSWLGVWARTENDEPLVGTWVVSRGAGLAEQGIEV 209
            T A +  D + +SG+K++ +G  +   L V  RT    P  G   ++  A    +GI  
Sbjct: 137 QTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPK-GISAIAIPAD--SEGIIY 193

Query: 210 RETWNHIGMRASGSHEVVFRDVFVPDDHVGELRPPAGWAAPDAVATAWMATLFSGVYD-- 267
            +  + +G  A  +  V F +V VP   V  L    G     A     M  L  G  +  
Sbjct: 194 GKAEDKMGWNAQPTRLVTFDNVRVP---VANLLGEEGQGFTFA-----MKGLDGGRINIA 245

Query: 268 ----GIARSARDWLVGFLHARKPTGLNGGSLATVPRLQEALGGIEALLLTNRILLRSLSA 323
               G A++A +    +++ R+  G     LA    LQ  L  +   L+  R ++R  + 
Sbjct: 246 TCSVGTAQAALERATQYMNERQQFGK---PLAAFQALQFKLADMATELVAARQMVRLAAF 302

Query: 324 AVDSGSPPSSSDSLLVKYTVTNNAIDAVARALEITGNPGLSRDHPLERHHRDVLCARVH 382
            +DSG P +++   + K   T+        AL+I G  G  R++PLERH RDV   RVH
Sbjct: 303 KLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDV---RVH 358