Pairwise Alignments

Query, 157 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 159 a.a., SecC motif-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (248), Expect = 1e-26
 Identities = 62/162 (38%), Positives = 80/162 (49%), Gaps = 18/162 (11%)

Query: 4   CPCGSG-----RSFEECCGPILAGDPAPTAEALMRSRYTAFVRHDLDHVERTHAPEIRDD 58
           CPCG        S+ +CC P   G  AP  E+LMRSRY+AFV     ++  TH P+  D 
Sbjct: 8   CPCGRSVKDKPLSYNQCCEPFHLGVIAPDPESLMRSRYSAFVLKLHKYLIATHHPDYLD- 66

Query: 59  FNRGEAERVADE---SEWQRLDVLRASEEGDVGTVEFQIHFRRDGNDMRHHERASFRQED 115
              G +  + DE   + W  L V R+S   D G VEF   ++        HE + F ++D
Sbjct: 67  ---GLSVEMLDEENHTSWLGLSVNRSSSAQDAGMVEFHAWYQGSNGLNAIHEISDFVKQD 123

Query: 116 GRWLYVSGEVNPKGEPRRVVKVGRNEPCPCGSGKKYKACCGK 157
           GRW Y  GE      P+      RN PC C SGKK+K CC K
Sbjct: 124 GRWWYTQGEQLVPKYPK------RNAPCVCQSGKKFKQCCLK 159



 Score = 23.1 bits (48), Expect = 0.002
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 5/19 (26%)

Query: 142 PCPCGSGKK-----YKACC 155
           PCPCG   K     Y  CC
Sbjct: 7   PCPCGRSVKDKPLSYNQCC 25