Pairwise Alignments

Query, 378 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  156 bits (395), Expect = 8e-43
 Identities = 101/287 (35%), Positives = 152/287 (52%), Gaps = 10/287 (3%)

Query: 11  IVTMVALSSLSVPAAAKAGRKSAARPVVAE---FLMDASSGAVLSARNADVSTYPASLTK 67
           I T++ +SS+S+P  A     +   P VA     LMD  SG +++  NA  S  PASLTK
Sbjct: 8   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTK 67

Query: 68  MMTLLLTFEALDRGQLRLDQPLPVSYYATTMA---PSRLGVVPGDTIRVEDAILALSTKS 124
           MMT  +  + +  G +  D  + +S  A +      S++ +  G T++V D    +  +S
Sbjct: 68  MMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQS 127

Query: 125 ANDVAVVLGEAIVGSEAAFAQTMTQRAREIGMRHTVFRNASGLPNREQRTTARDMALLAR 184
            ND  V + E I G+E AF   M   ++++GMR + F N+ GL +   +TTA DMALL  
Sbjct: 128 GNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGA 187

Query: 185 ELVRNHARYYPYFSRSSFDWQNQTVYGHNRLL-DQYDGMDGIKTGYIAASGFNLAASASR 243
            L+R+    Y  +S   + +     Y  N LL D    +DGIKTG+ + +G+NL ASA++
Sbjct: 188 ALIRDVPEEYRIYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 247

Query: 244 DGRRLIAVVLGGESARKRDRRIVELMDAGFR---NQAPAKPDDLLVS 287
           DG RLI+VV+G +S   R     +L+  GFR      P K  D  V+
Sbjct: 248 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVT 294