Pairwise Alignments

Query, 370 a.a., Sensor kinase CckA from Azospirillum sp. SherDot2

Subject, 956 a.a., PAS/PAC sensor hybrid histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score =  224 bits (572), Expect = 6e-63
 Identities = 135/321 (42%), Positives = 191/321 (59%), Gaps = 13/321 (4%)

Query: 57  AQLTHSLLAFARRQMLTPKPAHMLPLIAGMRPLLERTLGGLIRFDIDVPPGTAPVMVDPA 116
           A LTH LLAF+RRQ L P+P  +  L+ GM  L++RT+G  I  +     G  P +VD +
Sbjct: 637 AALTHRLLAFSRRQTLDPQPTDVNRLMKGMTDLIQRTVGPSIVVETLGATGLWPTLVDAS 696

Query: 117 QLESAILNLAINARDAMPQGGVLTLRADNIAIRRQGEPGCPAELAPGDYVAISLTDTGIG 176
           QLE+A+LNL INARDAMP GG +T+ A N  I   G+     ++  G Y+++ +TDTG G
Sbjct: 697 QLENALLNLCINARDAMPDGGRITIEASNRWI--DGDVARAHDMPEGHYLSLCVTDTGTG 754

Query: 177 MEEATLARAFEPFFTTKGVGGGSGPGLSMVYGMVAQSGGGVTIASKVGKGTSVTIFIPR- 235
           M    +A+AF+PFFTTK +G G+G GLSM+YG   QSGG V I S+VGKGT++++++PR 
Sbjct: 755 MTPDVIAKAFDPFFTTKPIGQGTGLGLSMIYGFANQSGGRVRIQSEVGKGTAISLYLPRY 814

Query: 236 ---ASEARALTQEPPSETIPGDGAVVLLVDDDLLVRAGAAAVLKMLGYQVIAATSGLEAL 292
              A+       + P E     G  +L+VDD+  VR      L  LGY +I A   L  L
Sbjct: 815 DGTAARDEGDVHKAPFE-FTQSGETILIVDDEPTVRMLLTDALGDLGYTLIEAADSLAGL 873

Query: 293 KVLQERMPVDVMITDYAMP-GMSGVALIQETRRLAPSLPVLLITGYTDRPE-GIERCA-- 348
           K+L+  + +D++ITD  +P GM+G  +    R + P L  L ITGY +    G E+    
Sbjct: 874 KLLRSDVHIDLLITDVGLPGGMNGRQMADAGREVRPHLKTLFITGYAENAAIGDEQLGPG 933

Query: 349 --VLHKPFKPQALAEQIATLL 367
             VL KPF  +ALA ++  L+
Sbjct: 934 MRVLTKPFAIEALAARVQELM 954