Pairwise Alignments

Query, 177 a.a., IS110 family transposase ISHne4 from Azospirillum sp. SherDot2

Subject, 310 a.a., IS110 family transposase from Pseudomonas fluorescens SBW25-INTG

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 10/175 (5%)

Query: 2   RKREATRLQQTADAEASADIRSLLVVLDRRIAKIEERMTALVAAGPEMAVIDRR----LR 57
           R  +  RL+ T+       ++S +  L + + ++E    +L+    E   +DR+    L 
Sbjct: 138 RDDDKRRLKTTSSDVVKPALQSHIDYLQKVLKELE----SLIRQSAER--LDRKKVALLC 191

Query: 58  TIPGAGAVVAATLIAELPELGQLDRRRIASLVGLAPVARDSGKRSAPRAIAGGRPIVRTV 117
           ++ G G V AA+L++ LPELG++ R +IA+L G AP   DSGK    R I+GGR   R  
Sbjct: 192 SVKGIGLVTAASLMSYLPELGEVGRHQIAALSGTAPYNDDSGKHKGKRHISGGRFAARRS 251

Query: 118 LYIAALHASRWCQAFKEFRARFQTAGKPVKAALIATARKLLVTLNAMIATGTDYE 172
           LY+A     R+   F       +  GK  K ALIA  R LLV LNAMI  G++++
Sbjct: 252 LYMACWSVIRFQPEFAARYKALREKGKCAKVALIACMRVLLVRLNAMIRDGSEWK 306