Pairwise Alignments

Query, 399 a.a., Xylose transport system permease protein XylH from Azospirillum sp. SherDot2

Subject, 378 a.a., Xylose ABC transporter, permease protein XylH from Pseudomonas fluorescens FW300-N2E2

 Score =  267 bits (682), Expect = 4e-76
 Identities = 147/378 (38%), Positives = 223/378 (58%), Gaps = 8/378 (2%)

Query: 16  SMAKFLKSHMRDYGMLISLLAIVAFFQYMTNGTLLQPLNLTNLVLQNSYIVIMALGMLLV 75
           +  K L S  +   ++I++  I  FF + T G  + P NL+NL+ Q S   I+A GM+LV
Sbjct: 2   NQVKQLFSRYKMLALVIAVALIWLFFSWQTEGGFVTPRNLSNLLRQMSITGILACGMVLV 61

Query: 76  IVAGHIDLSVGSIVGFIGALAAILMVQFHWHFIPTAIVSLLAGAAIGAAQGYWVAYFRIP 135
           I++G IDLSVGS++G +G LAAIL V +H   +    +  L G  IG   GY  AY RIP
Sbjct: 62  IISGEIDLSVGSLLGLLGGLAAILDVVYHIPLLANLSLVALCGLVIGLGNGYMTAYLRIP 121

Query: 136 SFIVTLAGMLVFRGLSLALLAGQSVGPFPVEFQRLSSGFIPDIFGTEGFHTTTMVLCLAT 195
           SFIV L GML FRG+ L +  G ++ P   E   +  G++P        HT    L +  
Sbjct: 122 SFIVGLGGMLAFRGVLLGVTGGTTIAPVSPELVYVGQGYLP--------HTVGTGLGILL 173

Query: 196 PAILIAFSVAARLRRHRFAIEQEPLVLFLLKSAGLFAVVAYVGWLLSTYKGLPNVLIIMA 255
            A+ +  +   R  R    +    LV  +L+   + AV+A   + L++Y G+P  ++++ 
Sbjct: 174 FALTLFLTWKQRRNRALHGLAAHSLVRDVLRVVVIGAVLAGFVYTLNSYDGIPVPVLLLL 233

Query: 256 LLIGIYAFVTRDTTIGRRIYALGGNEKAAKLSGIDTRRLSFYTFVNMGVLAALAGLIFAA 315
           +L+G++++VT  T  GRR+Y++G N +A +LSGI+ + +  + F  MGV+ ALAG++  A
Sbjct: 234 ILLGVFSYVTSQTVFGRRVYSVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGVVNTA 293

Query: 316 RLNTATPKAGVSFELDVIAACFIGGASASGGVGRVTGAVIGAFIMGVMNNGMSIVGIGID 375
           RL   +P AG   ELD IAACFIGG S  GG G V GA++GA ++  ++NGMS++ +   
Sbjct: 294 RLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSY 353

Query: 376 WQQVIKGLVLLAAVCFDV 393
           WQ ++KG +L+ AV  DV
Sbjct: 354 WQMIVKGSILVLAVWVDV 371