Pairwise Alignments

Query, 697 a.a., Flagellar biosynthesis protein FlhA from Azospirillum sp. SherDot2

Subject, 699 a.a., flagellar biosynthesis protein FlhA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  500 bits (1287), Expect = e-145
 Identities = 276/675 (40%), Positives = 426/675 (63%), Gaps = 11/675 (1%)

Query: 30  ILLVLAVLFLPVPSWFLDLGLALSFSVAVLVLMVSLWIPRPLDFSSFPTVLLVVTMLRLA 89
           +L  LA++ LP+P + LD+  + + ++A++VL+V+++  RPLDF++FPTVLLV T+LRLA
Sbjct: 27  VLAALAMIVLPIPPFLLDILFSFNIALALVVLLVAIYTDRPLDFAAFPTVLLVATLLRLA 86

Query: 90  LNIASTRLILSEGHNGHAAAGHVIQGFSQFVMGGNFVIGVVIFCILVVINFVVITKGATR 149
           LN+ASTR++L EGHNG  AAG VI+ F   V+GGN+ +GVV+F IL++INF V+TKGA R
Sbjct: 87  LNVASTRVVLLEGHNGGDAAGKVIEAFGSVVIGGNYAVGVVVFIILIIINFAVVTKGAGR 146

Query: 150 IAEVGARFTLDAIPGKQMAIDADLSAGMIDEAEARRRRKELEDESTFYGAMDGASKFVRG 209
           IAEV ARFTLDA+PGKQMAIDADL+AG+I++ +AR RR E+  E+ FYGAMDGASKFV+G
Sbjct: 147 IAEVSARFTLDAMPGKQMAIDADLNAGIINQDQARTRRAEVTREADFYGAMDGASKFVKG 206

Query: 210 DAVAGLVITVINVLGGMAIGIAQKGMSFEHAASIYTTLTVGDGLATQIPALVVSLAAGLL 269
           DA+AG++I VIN+LGG  IGI Q G++F  AA IYT LT+GDGL  QIP L++S+AA L+
Sbjct: 207 DAIAGIMILVINILGGFIIGIVQHGLTFAQAAEIYTLLTIGDGLVAQIPGLLLSIAAALM 266

Query: 270 VTKGGNVGSAEKAVIDQLGAYPKALLVASGLLVSLALTPGLPMAPFLAIGAAFALLGWYA 329
           VT+    G   + ++ Q+    K+L +A+G+L  + + PG+P   FL+         ++ 
Sbjct: 267 VTRQNESGDMGQMLMSQMFDSHKSLGIAAGVLFVMGIVPGMPHMAFLSFAVMTGGAAYFV 326

Query: 330 PRR----KARAAALAKLEESRKAPAAVPEEAVEDMLKVDEVKVEVGNHLVPLI-LNKNGP 384
            +R    +A+A    K   + +      E + +D+  VD + +EVG  L+PL+   + G 
Sbjct: 327 FKRNEAKRAKALEQVKTGPTERTEREPKELSWDDVHHVDTIGLEVGYRLIPLVDKGQGGE 386

Query: 385 LTTKVKTLRKRFATEFGFVLPSVRIKDSSFLAPKSYVISIMGVEAAKGEVRPKHLLAIDP 444
           L +++K +RK+ + E GF++P+V I+D+  L+P +Y IS+MGV   + ++R    LAI+P
Sbjct: 387 LLSRIKGVRKKLSQELGFLVPAVHIRDNLDLSPNAYRISLMGVVVGEADIRHDCELAINP 446

Query: 445 TGGAVPDIAGDATREPTFGLQAKWIDPARHEEAVAKGYTVVDPESVITTHLTEVIKDNLS 504
            G     + G  TR+P FGL+A WI P   E A   GYTVVD  +V+ TH+++++ +N +
Sbjct: 447 -GQVYGKLDGIETRDPAFGLEAVWIAPELREHAQTLGYTVVDAATVVATHISQILTNNAA 505

Query: 505 TLLTFAALQKLIDGLGREYQKLINDMVPSQISLVVLQRVLQQLLSERVSIRNLPAIVEAV 564
            LL +   Q+L+D L +   KL++  +P  + L  + +V+Q LL+E VS+R+L  IV+ +
Sbjct: 506 KLLGYEEAQQLMDMLAKHSPKLVDGFIPDVMPLGNVVKVMQNLLNEGVSVRDLRTIVQTL 565

Query: 565 AEAVGWTRHITLITEHVRMRLGQQIHQGLAGPDGFVSVIALSPRWEQALLDNIVVEGDDR 624
            E    +    ++T  VR+ L + I Q ++GP+  + VI L+P  EQ L  ++   G D 
Sbjct: 566 LEYGTKSNDTEVLTAAVRIALKRMIVQEISGPELEIPVITLAPELEQMLHQSMQATGGDG 625

Query: 625 RFVMP--PSQVQEFLTAVRLKIQKHATSQIWPALLVGAEARPFVRSLLERVSPMTPVLSH 682
             + P    ++Q+ L     K +      I   LL     R  +   ++   P   V+S+
Sbjct: 626 PNIEPGLAERMQQSLADAAQKQEMVGQPAI---LLTSGMLRATLSRFVKYTIPNLRVISY 682

Query: 683 AELHRKAALKTVDQV 697
            E+  +  ++ V  V
Sbjct: 683 QEIPDEKQIRIVSAV 697