Pairwise Alignments

Query, 256 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 265 a.a., flagellar biosynthetic protein FliR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 5e-15
 Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 7/226 (3%)

Query: 23  LARVAAAIGLLPGFGEAAVPMRVRAALAVIVTLVLLPGVEGLPDRMPDQPVEMLRALAGE 82
           L RVA+ + ++  FG A  P RVR  LA+ +TL + P +  + D      +  +   A +
Sbjct: 19  LFRVASMLMVMVVFGAATTPTRVRLLLAIAITLAIAPVLPPVKDAQLFS-LSAVFITAQQ 77

Query: 83  TLVGAYLGLGARLFMAALQTAGAVAAQVVGLSNPFSMAAAGFEGGSVLSGVLLIGGLALL 142
            ++G  +G   ++ M      G +      L     +  +  +   V+    L+    + 
Sbjct: 78  IIIGVAMGFVTQMVMQTFVLTGQIIGMQTSLGFASMVDPSSGQQTPVIGNFFLLLATLIF 137

Query: 143 FASDVHYLMIGALARSYGSWPAGVFPDLGMVAQRF---AELLASTFRLGVGLAAPFILYG 199
            A D H LMI  L  S+ + P     ++G+    +   AE  +  F   + ++   I+  
Sbjct: 138 LAVDGHLLMIRMLVASFDTLP---ISNVGLTLTSYRSLAEWGSYMFGAALTMSLSAIIAL 194

Query: 200 LVVNLALGLVNRVMPAMPVYFVATPGVLMIGMGLFMATAGAMLTAF 245
           L+VNL+ G++ R  P + ++ +  P  ++ G+ +   T   ++  F
Sbjct: 195 LLVNLSFGVMTRAAPQLNIFSIGFPITMIGGLLILWLTLTPVMAHF 240