Pairwise Alignments

Query, 1265 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1261 a.a., response regulator from Synechocystis sp000284455 PCC 6803

 Score =  353 bits (906), Expect = e-101
 Identities = 247/674 (36%), Positives = 344/674 (51%), Gaps = 64/674 (9%)

Query: 583  LDAAREEADALRARAEAATQAKSEFLAAMSHEIRTPMNGIQGMTELLFDTPLTDEQRQFA 642
            + AA  E    +  AE A++ K++FLA MSHEIRTPMN + GMT L   T LT  QR++ 
Sbjct: 506  IKAAEAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYL 565

Query: 643  QAIRSSSNALLTIINDILDISKLEAGRVTIETLPFDAADLVEGVVELLTPRAHEKGIEIG 702
              IR S   LL +INDILD SK+EAG++ +E++ FD   +++ V  L++ +A  KG+E+ 
Sbjct: 566  HKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELL 625

Query: 703  FYIDPLLRRTLLGDPTRIRQILVNLVGNAVKFTDRGSVAVELEVLDATDAHLVLRITVTD 762
            F ID  L R  +GDP R+ QIL+N   NAVKFT++G + + + + +  D  +VL + V D
Sbjct: 626  FDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKD 685

Query: 763  TGIGIPAEAMPTLFNKFQQVDGSITRKFGGTGLGLAICRQLSELMGGSIAVESSLGIGSR 822
            TGIGI  E +  LFN FQQ D S TR FGGTGLGLAIC++++ELMGG + VES  G GS 
Sbjct: 686  TGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGST 745

Query: 823  FLVDLPLALSEEALP---PAEQPLAGRSVLVVDDLAVNRRVLASMLDSLGAWPTCVESGP 879
            F   + L  S   +P      + L G+ VLVVDD    R V+  +L+ +      VESGP
Sbjct: 746  FWAKVCLQKS-NVIPHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGP 804

Query: 880  DALEALRRGAAGGRPFDVVLADQTMPGMGG----------------DTLLATVAGDPAL- 922
            +AL  L        P  +V  D  MP M G                   + T  G   L 
Sbjct: 805  EALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELF 864

Query: 923  -----IGTRRVLIVTLGPAVRGESGPAPGLAHATLNRPLRQSSLAACLTGLFAAAAPAAS 977
                 +G   VL+  + P+V  +S          L + +RQS                 S
Sbjct: 865  VKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQS-----------------S 907

Query: 978  AVPSAEAKVEDV--LRRGRILLAEDNRTNQLFATTLLRRLGYTVEVAEDGEQAVAAACRG 1035
             + + +  +E +  +R  RILL EDN  NQ  A  LLR +G+ V+VA +G  A+      
Sbjct: 908  GIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNN 967

Query: 1036 GLDLVLMDVQMPGMDGLEAAQAIRARGGALAGLPIIALTADAMPGTRELCLRAGMSDYLT 1095
               LVLMD+QMP MDG+EA  AIR +    A LPI+A+TA+ M G RE CL+AGM+D+L 
Sbjct: 968  AYALVLMDMQMPEMDGIEATIAIR-QNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLG 1026

Query: 1096 KPISRAGLLSALDRWIGTAEP--PAAAAEAGGGSGKGSAAV-NDDGSGEDGEALDEAVLD 1152
            KPI    L + L  WI    P  P    E+   +     ++ +  G   D         D
Sbjct: 1027 KPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNSD---------D 1077

Query: 1153 DLVETVGADSLAL-IVDSFLEDVSHRLERLSAMDDAMPAGTVDLRALAQEAHDLSSLAGS 1211
             L   +G  SL L ++  F+   S  L  ++        G  D     + AH L  +AG+
Sbjct: 1078 GLRRVLGKKSLYLKMLHKFVASQSSFLPEIT-----QALGEKDYGFAERLAHTLKGVAGN 1132

Query: 1212 FGGMAVMHIAWRME 1225
             G   +   A  +E
Sbjct: 1133 IGAQELQQEAAELE 1146



 Score = 32.3 bits (72), Expect = 3e-04
 Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 45/215 (20%)

Query: 126 LVADGRKLGTLCVIDDRP-------RGGFDAREAETLAQLARLVVDEMTLRREV----AR 174
           L+ +G  +G  C +D            G +     +L  L  L   EM +   V    AR
Sbjct: 330 LLQEGEDVGPTCPLDQEEFEILGTRYDGSEFPIEVSLTSLPSLSQREMNIFASVRDISAR 389

Query: 175 RELAEAELRDRSRLLNLAEE-----------IGQFGHWYVDFVTDIRRWSDEVYRILGLP 223
           +E  +  LR R  L ++ +            I QF + ++  + D++         +G  
Sbjct: 390 QEAQQQILRQREHLQSVLDSAPVGVAITVNGITQFANPHIGELVDLK---------VGDS 440

Query: 224 PQQQQPTVELSRACYHPDDRKPLADLVERARKTGEGFSIEARVIRPGGALRHVFIRGMAE 283
           PQ+    V+L        DR+    ++E   + G   S   ++  P G +R +    +A 
Sbjct: 441 PQKIY--VDLG-------DRQ---QMLEELTQFGRSQSRVYKMYNPRGEIRDILATFLAT 488

Query: 284 CGDDGRPVGLLGVVQDITDAKREEAELRSNRELLD 318
             D     G+LG + DIT  K  EAE++  +EL +
Sbjct: 489 --DYEGQKGILGWLADITPIKAAEAEMKRAKELAE 521