Pairwise Alignments

Query, 1265 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  335 bits (858), Expect = 2e-95
 Identities = 239/713 (33%), Positives = 369/713 (51%), Gaps = 53/713 (7%)

Query: 547  TSNGSLVCTRTDITERKRFEAELQRQAADMCALAEGLDAAREEADALRARAEAATQAKSE 606
            + +G+ +  +  +T     + ++         L E L   +E ADA R +A  A++AKS+
Sbjct: 481  SKSGARITVKLSVTTLYGEDKDIMGYLGIAYDLTEQLKREQELADA-REQALQASRAKSD 539

Query: 607  FLAAMSHEIRTPMNGIQGMTELLFDTPLTDEQRQFAQAIRSSSNALLTIINDILDISKLE 666
            FLA MSHEIRTPMN + G+ ++   T L    R + +  + ++ +LL ++NDILD SK+E
Sbjct: 540  FLANMSHEIRTPMNAVLGLLQMTLQTELPPRPRDYLEKTQQAAKSLLALLNDILDFSKIE 599

Query: 667  AGRVTIETLPFDAADLVEGVVELLTPRAHEKGIEIGFYIDPLLRRTLLGDPTRIRQILVN 726
            AGR+ +E   F    L+  +  +L+ +  +K IE+ + + P +   L+GD  R+RQIL+N
Sbjct: 600  AGRIELERQGFSLQQLLGDMGSILSSQVQQKDIELVYQVAPSVPDQLIGDSLRLRQILLN 659

Query: 727  LVGNAVKFTDRGSVAVELEVLDATDAHLVLRITVTDTGIGIPAEAMPTLFNKFQQVDGSI 786
            ++ NA+KFT++G +   ++     D    L I + D+GIG+  E    +F  F Q D SI
Sbjct: 660  VLTNAIKFTEKGDIITRIDADLGDDGTCHLHIEIQDSGIGMTNEQQAIIFKGFSQADSSI 719

Query: 787  TRKFGGTGLGLAICRQLSELMGGSIAVESSLGIGSRFLVDLPLALSEEALPPAEQPLAGR 846
            +R++GGTGLGLAI R+L  LM G I V SS G+GS F +D+ L        P  +  +G 
Sbjct: 720  SRRYGGTGLGLAITRELVHLMQGEIRVTSSPGVGSTFTIDVQLGFDATKYRPGAR-FSGV 778

Query: 847  SVLVVDDLAVNRRVLASMLDSLGAWPTCVESGPDALEALRRGAAGGRPFDVVLADQTMPG 906
             VL+V+D   +R V + +L  LG   T + +G  A++ + R A     FDV+LAD  +PG
Sbjct: 779  RVLLVEDNHTSRLVFSELLRDLGCEVTALNNGLTAMKTIERMAPDS--FDVLLADWQLPG 836

Query: 907  MGGDTLLATVAGDPALIGTRRVLIVTLGPAVRGESGPAPGLAH------ATLNRPLRQSS 960
            + G  L + +    +L     ++IVT       E+     L H      ATL +P+ +  
Sbjct: 837  LDGLELASWIRHLDSLSRQPGIIIVTAFSQAMLEA----QLKHREEEFDATLIKPVTREM 892

Query: 961  LAACLTGLFAA----AAPAASAVPSAEAKVEDVLRRGRILLAEDNRTNQLFATTLLRRLG 1016
            ++ CL  +            S +P A + V       R+LL EDN TN+L AT+LL +LG
Sbjct: 893  VSRCLQSVLERHNNDGLDMLSHLPLAPSLV-----GRRLLLVEDNATNRLVATSLLGQLG 947

Query: 1017 YTVEVAEDGEQAVAAACRGGLDLVLMDVQMPGMDGLEAAQAIRARGGALAGLPIIALTAD 1076
              V  A DG QA+    R   DLVLMD+QMPGMDG +  + IR     L  LPIIA+TA+
Sbjct: 948  AEVIEAVDGFQALKLLSRQQFDLVLMDIQMPGMDGYQTTRKIR-NELMLTDLPIIAMTAN 1006

Query: 1077 AMPGTRELCLRAGMSDYLTKPISRAGLLSALDRWIGTAEPPAAAAE---------AGGGS 1127
            AMP  ++ C  AGM+ +++KP     + + L +++   E P  ++E         AG  +
Sbjct: 1007 AMPEDKQACRDAGMNCHISKPFEIDEVATKLLQYLSPPEHPMRSSEALAEDESTSAGSLT 1066

Query: 1128 GKGSAAVNDDGSGEDGEALDEAV----------LDDLVETVGADSL-ALIVDSFLEDVSH 1176
                AAV +  + +D  AL ++V          L++    +G   L   ++D FL D+S 
Sbjct: 1067 AAPEAAVTEMHNPKD--ALPQSVRQFSQANGLDLEEACNRLGDRELFTRVIDQFLLDISQ 1124

Query: 1177 RLERLSAMDDAMPAGTVDLRALAQEAHDLSSLAGSFGGMAVMHIAWRMEVLCR 1229
                LS  + AM    +       + H L S A S G  A+  +    E  CR
Sbjct: 1125 AQRCLSVPEIAMKDARI-------QYHSLKSGAASCGFTALALVLRNAEANCR 1170



 Score = 27.3 bits (59), Expect = 0.009
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 285 GDDGRPVGLLGVVQDITDAKREEAELRSNRE 315
           G+D   +G LG+  D+T+  + E EL   RE
Sbjct: 498 GEDKDIMGYLGIAYDLTEQLKREQELADARE 528