Pairwise Alignments

Query, 1168 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1156 a.a., sensor histidine kinase from Pseudomonas fluorescens SBW25-INTG

 Score =  839 bits (2167), Expect = 0.0
 Identities = 498/1180 (42%), Positives = 689/1180 (58%), Gaps = 48/1180 (4%)

Query: 1    MESWFILAASLAYLLSLFAIAWYGDRTGPHGSERRTPWLYALSFGVYCTSWTFYGAVGRA 60
            + S  I A +LAY+  +FAIA+YGDR       R   W+Y+LS  VYCTSWTF+GAVG+A
Sbjct: 3    LSSGLIAAVALAYMAIMFAIAFYGDRRRAPLPPRVRAWVYSLSLAVYCTSWTFFGAVGQA 62

Query: 61   ATGGFYFLPIYIGPILMIGLGWPVLARIVRVAKSENVVSISDFLSARYGKSRSLAALVTV 120
            A   + FLPIY+GP+L++ L   VL +++ ++K EN+ SI+DF++ARYGKS+SLA +V +
Sbjct: 63   AEQLWAFLPIYLGPVLLLVLAPWVLQKMILISKQENITSIADFIAARYGKSQSLAVVVAL 122

Query: 121  AAVIGLLPYIALQLKAISVSFEILAGASLGTDLSQMPGGTALMAALLMAAFAILFGVRSV 180
              ++G+LPYIALQLK I +   +L GA   T  ++    TAL+ +L++A F I+FG R++
Sbjct: 123  ICLVGVLPYIALQLKGIVLGVNLLIGAGADTTGTRAQ-DTALIVSLVLALFTIVFGTRNL 181

Query: 181  SANEHHRGLMMAIAAESVVKLAAALGVGGAIALSVFGDPATFFDAAVRHPGFLELIRMDS 240
             A EHHRG+++AIA ES+VKL A L VG  +   ++      F  A+  P   E  +   
Sbjct: 182  DATEHHRGMVLAIAFESLVKLFAFLAVGAFVTYGLYDGFGDLFSQAILAPRLEEYWKETV 241

Query: 241  IGTDWWVACLLSGLAILCLPRQFHVAVVENTHGGDVRSSAKLFPAYLVAINIFVLPVALA 300
                  V   ++ +AI+CLPRQFHV VVEN    D+R +  +FPAYL+   +FV+P+AL 
Sbjct: 242  NWPSMVVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLILAALFVVPIALG 301

Query: 301  GLMLFPDGTTNADTFMVSIPLSQGWPWLALAAFIGGLSAATSMILVEMVALSTMICNDVA 360
            G M+ P G+   D++++S+P+++  P LA+ AFIGG SAAT M++V  +ALSTM+ ND+ 
Sbjct: 302  GKMMLP-GSVLPDSYVISLPMAEAHPALAVLAFIGGASAATGMVIVASIALSTMVSNDML 360

Query: 361  VPLLMALRPDDRRLRDDPAGILLLVRRSAVIVLVLLSYGCYRLIGPAFPLATIGMMSFTA 420
            +P L+  R    R  +     +L VRR ++++++LL+Y  YRL+G    LATIG ++F A
Sbjct: 361  LPWLLR-RSSAERPFEVFRHWMLSVRRVSIVIILLLAYVSYRLLGSTASLATIGQIAFAA 419

Query: 421  VAQFAPALLGGLIWSRASRSGAFAGICAGFVGWAYTMLLPSFADA-GWLAS-----SALR 474
            V Q APA+LG L W +A+R G FAG+ AG   W YT++LP  A + GW  S     + + 
Sbjct: 420  VTQLAPAMLGALYWKQANRRGVFAGLAAGTFLWFYTLVLPVTAKSLGWSLSLFPGLTWMH 479

Query: 475  EGPFGLTGLSPVALAGIAGIDPLTNAALWSLGPNLLLFVVVSLLTRPSTLERQQAARFMS 534
              P GL+            +  LT   ++SL  N  LFV VS+L+R    E  QA RF+ 
Sbjct: 480  SHPLGLS------------VTSLTLGTVFSLAGNFTLFVWVSMLSRTRVSEHWQAGRFIG 527

Query: 535  LRRASDGEPHGPRGATLADLHDLALRYVGQSRADAAFRRFTGVADGDLRTALLMRTDGEA 594
               +            ++DL  LA R+VG+ RA  +F RF                D + 
Sbjct: 528  QEISQRASARSMLSVQISDLLSLAARFVGEERAQQSFIRFAYRQGKGFNPN--QNADNDW 585

Query: 595  IQLTERLLAGAVGSASARVVVAGLLSDRRLSRTDARSIIDEASRAILKQHELLRATVENV 654
            I  TERLLAG +G++S R VV   +  R +   D   I DEAS  +     LL+  +EN+
Sbjct: 586  IAHTERLLAGVLGASSTRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENI 645

Query: 655  PQGIAVFDEDWRVATWNNQFVVLLELPDGFVQVGTSLQDIVGLIARRGEYGRNGEIETLL 714
             QGI+V D+  ++  WN +++ L   PDG + VG  + DI+   A RG  G  GE E  +
Sbjct: 646  TQGISVVDQSLKLVAWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCG-PGEAEVHV 704

Query: 715  ERRSDPRRRNKPDVYERVRPDGTVLEIATNPMPGQRPGGGGGFVAVYTDVTERHRAAAAL 774
             RR    R+ +    ER+ P+G V+E+  NPMP      GGGFV  +TD+T    A  AL
Sbjct: 705  ARRLHWMRQGRAHTSERLFPNGRVIELIGNPMP------GGGFVMSFTDITAFREAEQAL 758

Query: 775  REANETLERRIEERTH-------ALSEAKAEAERANRGKTRFLAAASHDLLQPLHAARLF 827
             EANE LE+R+ ERTH       AL++AK  AE A++ KTRFLAA SHDL+QPL+AARLF
Sbjct: 759  TEANEGLEQRVTERTHELSQLNVALTDAKGVAESASQSKTRFLAAVSHDLMQPLNAARLF 818

Query: 828  LSALGERN------GDSAIRQIDTSLRSVETILGDLLDVSKIDSGVVKPNPVPMRIEELL 881
             +AL  +N          ++ +D+SLRS E ++ DLLD+S++++G + P   P  + EL 
Sbjct: 819  SAALSHQNDGLSSEARQLVQHLDSSLRSAEDLISDLLDISRLENGKINPQRQPFVLNELF 878

Query: 882  KPLGEEFTVLASRHGLGLRVVDCSAIVRSDPTLLRRILQNYLANAVRYTRTGRILLGCRR 941
              LG EF  LA   GL  R+      V SD  LLRRILQN+L NA RY   G +LLG RR
Sbjct: 879  DTLGAEFKALAQEQGLRFRLRGSRLRVDSDIKLLRRILQNFLTNAFRYA-DGPVLLGVRR 937

Query: 942  RGSFLSIEVWDTGPGIPEHKVPEIFMEFRQLDNDGDDRGDRGKGLGLGLAIVERLAGILG 1001
            R   L +EVWD GPGIP+ K   IF EF++LD+    R +  KGLGLGLAI + L  +L 
Sbjct: 938  RKGELCLEVWDRGPGIPQDKQKVIFEEFKRLDSH-QTRAE--KGLGLGLAIADGLCRVLD 994

Query: 1002 HTVQVRSKVGRGSAFSVLVPLTDEPVAARAVVVRPRGRDLRGVLVLCLENEPAIARATED 1061
            H + VRS  G+GS FSV VPL            +  G  L G  VLC++NE +I      
Sbjct: 995  HRLSVRSWPGKGSVFSVRVPLARNQATPLVKTPQETGLPLSGAQVLCVDNEESILIGMRS 1054

Query: 1062 LLSSWSCRVVTAVAPDLALAKL-EGRTPDVILTDYHLDRSLTGVEALRTLRASLGSDIPA 1120
            LL+ W C V TA       A L EG  P + L DYHLD   TG E +  LRA L   IP 
Sbjct: 1055 LLTRWGCEVWTATDQAQCAALLAEGVRPQLALVDYHLDHGETGTELMGWLRAQLAEPIPG 1114

Query: 1121 AVVTADRDAAVREDIEAAGCRLLYKPVRPGALRALLGQLL 1160
             V++AD    +  ++ AAG   L KPV+P ALRALL + L
Sbjct: 1115 VVISADGRPEMVAEVHAAGLDYLAKPVKPAALRALLSRHL 1154