Pairwise Alignments

Query, 1168 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 883 a.a., PAS-domain containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  404 bits (1038), Expect = e-116
 Identities = 244/593 (41%), Positives = 345/593 (58%), Gaps = 43/593 (7%)

Query: 598  TERLLAGAVGSASARVVVAGLLSDRRL--------SRTDARSIIDE-------ASRAILK 642
            T RL A     A A +++ GL   +R         SR +   ++         A  ++++
Sbjct: 298  TARLAAAVAAGAWAPLILLGLFLQQRRRLIQHRLQSRAELERLVAHYTGELRSAQDSVVQ 357

Query: 643  QHELL---RATVENVPQGIAVFDEDWRVATWNNQFVVLLELPDGFVQVGTSLQDIVGLIA 699
              E      A++E++PQG++V D + R+  WN ++  + + P G +Q G  ++D++   A
Sbjct: 358  AAEAAASRNASLEHLPQGVSVVDRELRLVAWNTRYQEIFKFPPGLLQTGMPIEDVLRYNA 417

Query: 700  RRGEYGRNGEIETLLERRSDPRRRNKPDVYERVRPDGTVLEIATNPMPGQRPGGGGGFVA 759
            R G  G  G +E  ++RR D  R     ++ER RPDG+VLEI  NP+PG      GGFV 
Sbjct: 418  RLGRLGP-GSVEEAIQRRLDHMRSGSAHMFERERPDGSVLEIRGNPLPG------GGFVT 470

Query: 760  VYTDVTERHRAAAALREANETLERRIEERTHALSEAKAEAERANRGKTRFLAAASHDLLQ 819
             + D+T    AA  LR    TLE+RIEERTH L  AKAEAE ANRGKTRF+AAA HDLLQ
Sbjct: 471  SFADITAYKAAARDLRNLATTLEQRIEERTHDLEAAKAEAEHANRGKTRFVAAAVHDLLQ 530

Query: 820  PLHAARLFLSALGER---NGDSAIR-QIDTSLRSVETILGDLLDVSKIDSGVVKPNPVPM 875
            PL+AAR+++  L  R     D A+  +++++L++ + +L  LLD++++++G +    V +
Sbjct: 531  PLNAARMYVGVLRGRLPGGDDRALADRVESALQAQDDLLASLLDMARLEAGALSARAVDL 590

Query: 876  RIEELLKPLGEEFTVLASRHGLGLRVVDCSAIVRSDPTLLRRILQNYLANAVRYTRTGRI 935
             +E LL  L  +F +LA   GL L  V C A V SDP LLRR+LQN+L+NA+ YT  GR+
Sbjct: 591  PLEPLLTGLARQFGILAQSRGLALHYVPCQATVHSDPLLLRRVLQNFLSNAIHYTPRGRV 650

Query: 936  LLGCRRRGSFLSIEVWDTGPGIPEHKVPEIFMEFRQLDNDGDDRGDRGKGLGLGLAIVER 995
            LLGCRR  + + IEVWDTG GIPE K   IF EFR+LD  G +R   G+  GLGL+IV+R
Sbjct: 651  LLGCRRVDAGVRIEVWDTGVGIPEAKRQAIFEEFRRLDT-GIERD--GRSAGLGLSIVDR 707

Query: 996  LAGILGHTVQVRSKVGRGSAFSVLVPLTD------EPVAARAVVVRPRGRDLRGVLVLCL 1049
            +A +L H + +RS   RGSAFSV VP  D       PVA+ AV        LRG  V C+
Sbjct: 708  IARLLDHRIGLRSWPERGSAFSVTVPYGDPAGVPAAPVASSAVT--DEDSPLRGCRVWCI 765

Query: 1050 ENEPAIARATEDLLSSWSCR--VVTAVAPDLALAKLEGRTPDVILTDYHLDRSLTGVEAL 1107
            ++ P +  AT  LL  W C   +V +    +ALA+  G  PD++L DY L   +TG++ L
Sbjct: 766  DDAPRVREATGALLRHWGCEATLVDSAEQAMALAR-AGEAPDLLLLDYQLGEDVTGLDLL 824

Query: 1108 RTLRASLGSDIPAAVVTADRDAAVREDIEAAGCRLLYKPVRPGALRALLGQLL 1160
              L    G   P  V++A +DA  R  ++ AG R L KP  P ALRA++ Q L
Sbjct: 825  PRLAGRWGVQPPTIVLSAQKDAQTRMRVQEAGLRFLPKPAAPAALRAVISQAL 877