Pairwise Alignments

Query, 390 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 405 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 38/354 (10%)

Query: 32  FDSPGFASRLTAAYPDAITVGCSTA-GEIAGDSVLDGSCIATAIRFGKGTAVTATEAGIA 90
           +D+   +S L AA+P    +GCS+  G +  D       +     +    A   T   + 
Sbjct: 50  YDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQDGYFSNPAVGIMGIYDSPQAAYGT--ALI 107

Query: 91  SADDSQRAGEALGEAL------TARPG-LSGVLLFARGVGVNGSALIDGLSSRLPSGVPV 143
           S  D++   E + +A+        R G L  ++L     G+    LI+G+ ++  S VP+
Sbjct: 108 SLCDNRPIPELIDQAIDNALESADRTGELPSLVLLHATPGIE-EVLIEGIDNKFGSQVPI 166

Query: 144 SGGLAGDGGAFVRTLVLGPSGVSDGRAVAVGLYGDAVHLGLGSVGGWEPFGPARKVTKAV 203
            GG A D        +    G +D + +A+ L   +  +  G   G+ P   +  +TKA 
Sbjct: 167 IGGSAADNFISQNWSIFTQEGATD-KGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAK 225

Query: 204 DNLLLQLDGEPALNVYKRYLGDYARDLPASGLL------FPFELLNGNHDSVG----LIR 253
             ++ ++D E A  +YK ++GD++        L      FP   + G  +S      L  
Sbjct: 226 GRVIEEIDNESASGLYKEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTH 285

Query: 254 TILGIDEAAGGLILAGTVEEGFYLRLMHASTDGLVDGAEQAGAIAAAASASAMTIDATAE 313
            +   +   GGL +   VE G  + LM  S + L++   +    A+  S     +     
Sbjct: 286 PVRRTEN--GGLEMFANVEVGEQVSLMTGSQNQLIERVTRVIQEASYKSYQDRALFG--- 340

Query: 314 MAANMAGDRLALLTSCVGRKLVMGDRVEEEVQAVADRMRPGTVLAGFYSYGEIG 367
                     +L   C G  L +G  + +  Q + +++  G      +++GE G
Sbjct: 341 ----------SLTIFCAGSMLRLGQDIHKVQQKIMEQLN-GCAFICPFTFGEQG 383