Pairwise Alignments

Query, 892 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 563 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  243 bits (621), Expect = 2e-68
 Identities = 183/527 (34%), Positives = 275/527 (52%), Gaps = 35/527 (6%)

Query: 387 VLSGLMADANLLAGKLAEAGNAETPARLAAA-------RRMLDPLAATIRGTLTASGDDL 439
           + +G   + NLL    AE   A  PA    A       +   +    T+ G L AS    
Sbjct: 50  IKTGARMNQNLLTMSRAEYRMAANPAEFEDAYGFFSKNKAQFEERITTLEGMLPASHL-- 107

Query: 440 GAEVRRLAERLLALGFGNDGILALRTGELAAYAENATLIDSNRSTGAALTA-------MV 492
            +E+  L E      F N    A +T   A   + AT+ ++ R    A+T        ++
Sbjct: 108 -SEIATLREN-----FVNYLAAAEKTIATARANQGATIGEAQRQIYDAVTVSRAISNPLL 161

Query: 493 DGLVQAAERATADGAA---AAHEALERTNQVQILLATAGVLLAGLIVSLYVGRR-VVGRM 548
           D  +  ++    +G     AA    +   +    +A  G++L G+I  L + RR +V  +
Sbjct: 162 DSTLALSDDLDDEGTKVGDAADATFQTLTRWMFGVAFGGIVL-GVIAGLLIARRGMVQPI 220

Query: 549 ETLADAMRRVADGDLTVEQKADGN---DEITDMARALFVFIANARAMEEAHEKVEIERRN 605
            +L  +++ +  GDL  E+  DG    DE+ D+AR+  +F  NAR  +E  E    E+  
Sbjct: 221 GSLVGSLQALTAGDL--ERAIDGTERKDEVGDIARSALIFRDNARKAQELREAQAAEQ-- 276

Query: 606 AASARRTSMLE-IADQFERNVLSSVETLAEAARQMAARARSLTDIAANANDRADAAMQLS 664
            A A+R++ +E +   F+  V   +  +A A  +M   A  L+  A   N +A A    +
Sbjct: 277 VARAKRSAAIESLTRDFDHAVSDVLGVVAGACAEMETTAGGLSATADQTNIQASAVATAT 336

Query: 665 GEMAAGIQQVATAASEISQSIAEISKRTGESARIIGDTAAGAEQVKATVADLSSTAGEIG 724
            + +A +Q VATAA E+S SI+EI +R  +S+ +    +  A Q  ATV  L+ T+  IG
Sbjct: 337 EQASASVQTVATAAEELSASISEIGRRMEQSSHVAQIASQEAAQTNATVQSLADTSARIG 396

Query: 725 TVVGLIDEIAGQTNLLALNATIEAARAGEMGRGFAVVAGEVKALAGQTAQATAEIARQIA 784
            V+GLI +IA QTNLLALNATIEAARAGE G+GFAVVAGEVK LA QTA+AT +I  QI 
Sbjct: 397 AVIGLITDIANQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLASQTAKATEDIGTQIG 456

Query: 785 ATQAASRETAEVVAAMAGSVQRIESNASAIAAAVEEQATITSSIVDSSHRVAVGTQAASD 844
           A Q A+    + +A++   ++ I + ++AIAAAVEEQ+  T+ I  +  + A GTQ  SD
Sbjct: 457 AVQEATEGAVKAIASIVRRIEEINTISAAIAAAVEEQSAATAEIARNVQQAAAGTQEVSD 516

Query: 845 HVAGLSEAAAKVRAQAGDVLLVAEGLSHEATSLGSAVHLFLQEIRAA 891
            + G+S +A +    +  VL  A+ LS EA +L   V  FL  +RAA
Sbjct: 517 TIVGVSSSAGETGNASQQVLSAAQALSKEAVALKGLVERFLGGVRAA 563



 Score = 55.5 bits (132), Expect = 9e-12
 Identities = 78/363 (21%), Positives = 141/363 (38%), Gaps = 39/363 (10%)

Query: 548 METLADAMRRVADGDLTVEQKADGNDEITDMARALFVFIANARAMEEAHEKVEIERRNAA 607
           M TL +A R++      ++  A  N  +  M+RA +   AN    E+A+      +  A 
Sbjct: 33  MRTLGEAARQIDGYGDMIKTGARMNQNLLTMSRAEYRMAANPAEFEDAYG--FFSKNKAQ 90

Query: 608 SARRTSMLEIADQFERNVLSSVETLAEAARQMAARARSLTDIAANANDRADAAMQLSGEM 667
              R + LE       + LS + TL E      A A   T   A AN  A       GE 
Sbjct: 91  FEERITTLE--GMLPASHLSEIATLRENFVNYLAAAEK-TIATARANQGATI-----GEA 142

Query: 668 AAGIQQVATAASEISQSIAE----ISKRTGESARIIGDTAAGAEQ--------------V 709
              I    T +  IS  + +    +S    +    +GD A    Q              V
Sbjct: 143 QRQIYDAVTVSRAISNPLLDSTLALSDDLDDEGTKVGDAADATFQTLTRWMFGVAFGGIV 202

Query: 710 KATVADL----SSTAGEIGTVVGLIDEIAGQTNLLALNATIEAARAGEMGRGFAVVAGEV 765
              +A L          IG++VG +  +       A++ T      G++ R   +     
Sbjct: 203 LGVIAGLLIARRGMVQPIGSLVGSLQALTAGDLERAIDGTERKDEVGDIARSALIFRDNA 262

Query: 766 -KALAGQTAQATAEIAR--QIAATQAASRE----TAEVVAAMAGSVQRIESNASAIAAAV 818
            KA   + AQA  ++AR  + AA ++ +R+     ++V+  +AG+   +E+ A  ++A  
Sbjct: 263 RKAQELREAQAAEQVARAKRSAAIESLTRDFDHAVSDVLGVVAGACAEMETTAGGLSATA 322

Query: 819 EEQATITSSIVDSSHRVAVGTQAASDHVAGLSEAAAKVRAQAGDVLLVAEGLSHEATSLG 878
           ++     S++  ++ + +   Q  +     LS + +++  +      VA+  S EA    
Sbjct: 323 DQTNIQASAVATATEQASASVQTVATAAEELSASISEIGRRMEQSSHVAQIASQEAAQTN 382

Query: 879 SAV 881
           + V
Sbjct: 383 ATV 385



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 56/295 (18%)

Query: 235 QLRGAEAA--LAKSLLIGAFETNRSKVMSLSTDFDSALSDLQGALRPLAKSEAAAPVVAT 292
           +LR A+AA  +A++    A E       SL+ DFD A+SD+ G +     + A A +  T
Sbjct: 267 ELREAQAAEQVARAKRSAAIE-------SLTRDFDHAVSDVLGVV-----AGACAEMETT 314

Query: 293 INELAAFGDG---DASVYTRRVRQLTPGIPEAEGQKLTESLNASVDDI-VRLDRDANARM 348
              L+A  D     AS       Q +  +         E L+AS+ +I  R+++ ++   
Sbjct: 315 AGGLSATADQTNIQASAVATATEQASASVQTV--ATAAEELSASISEIGRRMEQSSHVAQ 372

Query: 349 LPLMLNSRGRIAEAGNAIAERMQDLSTNTVPAAQQRYTVLSGLMADANLLAGKLAEAGNA 408
           +        + A   NA  + + D S         R   + GL+ D       LA     
Sbjct: 373 I------ASQEAAQTNATVQSLADTSA--------RIGAVIGLITDIANQTNLLALNATI 418

Query: 409 ETPARLAAARRMLDPLAATIRGTLTASG---DDLGAEVRRLAERLLALGFGNDGILALRT 465
           E  AR   A +    +A  ++   + +    +D+G ++  + E                 
Sbjct: 419 EA-ARAGEAGKGFAVVAGEVKHLASQTAKATEDIGTQIGAVQE--------------ATE 463

Query: 466 GELAAYAENATLIDSNRSTGAALTAMVDGLVQAAERATADGAAAAHEALERTNQV 520
           G + A A     I+   +  AA+ A     V+    ATA+ A    +A   T +V
Sbjct: 464 GAVKAIASIVRRIEEINTISAAIAA----AVEEQSAATAEIARNVQQAAAGTQEV 514