Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 680 a.a., HAMP domain-containing methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  155 bits (392), Expect = 3e-42
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 7/319 (2%)

Query: 86  ERVGALAIAAPADQARRFARLARHWVLATLRAETAETRRVALMRDLSERVEREVGGFATE 145
           + +G +A A    + +   +  +  +     AE     R A +   +   E  VG     
Sbjct: 361 DEIGEMAAAVEEFKVQAARKAEQDAIAREREAEAGREARRAELIGFACEFESAVGAIVAH 420

Query: 146 LADAGRRLESAVAAVRSAGTDGLRQAADAAGAARAVDGSVSAIAGMLDRLASTSDQISGD 205
           ++DA  +LESA + +          +   AG ++     + A+A   ++L+++  +I   
Sbjct: 421 VSDAASQLESAASTLTRTAETTQALSGQVAGDSQQASSGMQAVASATEQLSASVGEIGRR 480

Query: 206 TSKAREISLAAASDSDRATTVMNSLRSAAEQIASVVKLINAIASQTNLLALNATIEAARA 265
             ++  I+ AA   +      +  L  AA+QI  V++LI  IA QTNLLALNATIEAARA
Sbjct: 481 VDQSSAIAEAAVEQAHETDDRIGKLTQAAQQIGEVMQLITTIAEQTNLLALNATIEAARA 540

Query: 266 GEAGRGFAVVANEVKALSRQTADATKQIADQVANLQKETAAVDEALGRIHSTIGSIQAIN 325
           GEAGRGFAVVA EVK+L+ QTA AT +I+ QVA +Q+ T     ++ RI STI  I  I+
Sbjct: 541 GEAGRGFAVVAAEVKSLATQTAKATDEISSQVAEMQEATRDSVTSIQRIGSTIAEISTIS 600

Query: 326 GTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQRIGDAEQTLGGVTRNLEELTALSRSIA 385
            ++A+A+ +Q   T ++A S+    Q      QR+      +  V R   E  A S  + 
Sbjct: 601 ASIASAVTQQDAATREIASSV----QGVAQGTQRVAG---NIAEVNRGAAETGAASAQVL 653

Query: 386 ERAGSLGSGLAGRVTDVLR 404
           + A SL +  A   T++ R
Sbjct: 654 QSARSLSAESARLRTELDR 672