Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 561 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  173 bits (439), Expect = 1e-47
 Identities = 107/309 (34%), Positives = 168/309 (54%), Gaps = 5/309 (1%)

Query: 85  GERVGALA--IAAPADQARRFARLARHWVLATLRAETAETRRVALMRDLSERVEREVGGF 142
           G+ VG +A  +    D A R   L R    A    E AE  R A M  L++  E  V G 
Sbjct: 242 GDEVGEMAKTVQVFKDNALRIRDLERAEEAAK---EHAEAERRAAMEQLADEFEHSVNGV 298

Query: 143 ATELADAGRRLESAVAAVRSAGTDGLRQAADAAGAARAVDGSVSAIAGMLDRLASTSDQI 202
              +A A   ++    ++ +  TD   +AA  + A+ +   +VS +A   + L+++  +I
Sbjct: 299 VQSVATATSGMQQTAQSMTATATDASARAATVSSASASASNNVSTVASAAEELSASVTEI 358

Query: 203 SGDTSKAREISLAAASDSDRATTVMNSLRSAAEQIASVVKLINAIASQTNLLALNATIEA 262
           S    ++REI+  A  D+      +  L + AE+I  VV+LI++IASQTNLLALNATIEA
Sbjct: 359 SRQVEQSREIAGKAVDDAALTNQTVKLLATGAEKIGEVVQLIHSIASQTNLLALNATIEA 418

Query: 263 ARAGEAGRGFAVVANEVKALSRQTADATKQIADQVANLQKETAAVDEALGRIHSTIGSIQ 322
           ARAGE+GRGFAVVA+EVKAL+ QTA AT++I+ QVA +Q  T    +++G I +TI  + 
Sbjct: 419 ARAGESGRGFAVVASEVKALASQTAKATEEISAQVAAMQSSTNDAVQSIGGITATIAQMS 478

Query: 323 AINGTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQRIGDAEQTLGGVTRNLEELTALSR 382
            I   ++ A+++Q   T ++AR++      +      IG   +          ++ A +R
Sbjct: 479 EITMAISTAVEQQGAATREIARNIQSVAAGSTEISMHIGGVTEAASATGSAASQVLANAR 538

Query: 383 SIAERAGSL 391
            +  ++G L
Sbjct: 539 ELDAQSGEL 547



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 36/216 (16%)

Query: 195 LASTSDQISGDTSKAREISLAAASDSDRATTVMNSLRSAAEQIA-----SVVKLINAIAS 249
           +A T      +  + R++  A  +  + A       R+A EQ+A     SV  ++ ++A+
Sbjct: 248 MAKTVQVFKDNALRIRDLERAEEAAKEHAEA---ERRAAMEQLADEFEHSVNGVVQSVAT 304

Query: 250 QTNLLALNATIEAARAGEAGRGFAVVANEVKALSRQT---ADATKQIADQVANLQKETAA 306
            T+ +   A    A A +A    A V++   + S      A A ++++  V  + ++   
Sbjct: 305 ATSGMQQTAQSMTATATDASARAATVSSASASASNNVSTVASAAEELSASVTEISRQVEQ 364

Query: 307 VDEALGRIHSTIGSIQAINGTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQRIGDAEQT 366
             E  G+                 A+D+ A LT+   + L      A  AE +IG+  Q 
Sbjct: 365 SREIAGK-----------------AVDD-AALTNQTVKLL------ATGAE-KIGEVVQL 399

Query: 367 LGGVTRNLEELTALSRSIAERAGSLGSGLAGRVTDV 402
           +  +      L   +   A RAG  G G A   ++V
Sbjct: 400 IHSIASQTNLLALNATIEAARAGESGRGFAVVASEV 435