Pairwise Alignments

Query, 296 a.a., Flagellar biosynthetic protein FliP from Azospirillum sp. SherDot2

Subject, 254 a.a., flagellar type III secretion system pore protein FliP from Rhodopseudomonas palustris CGA009

 Score =  259 bits (662), Expect = 4e-74
 Identities = 129/266 (48%), Positives = 188/266 (70%), Gaps = 18/266 (6%)

Query: 29  SSLSPKALLMRARILLLALILAAGPAAAAPLDLNLGALGSLADGGSLSGRIVQGIVLLTV 88
           +S  P+ + + + +L++A++    PA A  + +NLG      +   ++ R +Q I LLTV
Sbjct: 3   ASTGPRRVFISSSVLIIAVLAMIAPAQAQDISINLGG-----NSPGVTERAIQLIALLTV 57

Query: 89  LSVAPGLLIMVTCFTRIIVVLSLLRSALGLQQSPPNMVLVSLAMFLTFHIMGPVIDSAWQ 148
           LS+AP +L+M+T FTRI+VVLSLLR+ALG   +PPN V+++LA+FLT  +MGP +  ++ 
Sbjct: 58  LSIAPSILVMMTSFTRIVVVLSLLRTALGTATAPPNAVIIALALFLTAFVMGPTLQKSYD 117

Query: 149 DGLRPLLNEQVTQEQGLERMIEPFRGFMASHVRDRDLAAFAAFTAKPKPAGESTEPARDE 208
           +G++PL+  ++  +  + R   P R FM  +VR++DL  F   + +P PA          
Sbjct: 118 EGIKPLIANEIGVDDAMVRASGPLRIFMQKNVREKDLKLFLDLSGEPPPA---------- 167

Query: 209 RPVTAESVDLRLLMPAFLLSELRRAFEIGFLLFLPFLVIDMVVAAILMAMGMMMLPPVMI 268
              T E + LR+LMPAFL+SEL+RAFEIGFLLFLPFL+ID+VVA+ILM+MGMMMLPPV++
Sbjct: 168 ---TPEDLSLRILMPAFLISELKRAFEIGFLLFLPFLIIDLVVASILMSMGMMMLPPVVV 224

Query: 269 ALPFKIIFFVLTDGWFLIAGSLIRSY 294
           +LPFK+IFFVL DGW L+AGSL++SY
Sbjct: 225 SLPFKLIFFVLVDGWSLVAGSLVQSY 250