Pairwise Alignments

Query, 390 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 335 a.a., flagellar motor switch protein FliM from Ralstonia solanacearum GMI1000

 Score =  137 bits (345), Expect = 4e-37
 Identities = 81/317 (25%), Positives = 160/317 (50%), Gaps = 8/317 (2%)

Query: 68  LSQEEIDRLL----NFGAPEGGGPEMSAIQ--RLVSSTTVNKDRLPMLDVVFDRMVRMLN 121
           LSQEEID LL    N    E    E ++++   L S   + + R+P L+++ +R  R   
Sbjct: 7   LSQEEIDALLKGVTNEVDEEPAEAEAASVRTYNLGSQERIVRGRMPTLEIINERFARNWR 66

Query: 122 TSLRQFASTNVEASLSKIEWLRYTDFQDAIELPALIGVARAEPWDNQMLVTIDSALIYCM 181
             L  F   N E S+  ++  +Y++F   + +PA I +   +P     L   D  LI+ +
Sbjct: 67  MGLFNFLRRNAEISVGPVKVQKYSEFIRNLVVPAAINLVHVKPLRGTALFVFDPNLIFIV 126

Query: 182 MDVLLGGRRSRPGRIDGRAYTSIERKMTERMMKVVLQDLGQSFDPLAQVDFVFDRLEVNP 241
           +D L GG      R++GR +T +E+++ +RM++++ +  G+++ P+  ++F   R+E++ 
Sbjct: 127 VDHLFGGDGRFHMRVEGRDFTQVEQRIIQRMLQLMFEHYGKAWQPIYPIEFEPLRMEMHT 186

Query: 242 QFATITRATNAIIRVRIAVEVERRTGHIDIVIPYATLEPVRGKLVQMFMGEKFGHDSVWE 301
           +FA +      ++  R ++E+    G + + +PY  +EP+R  L     GE    D  W 
Sbjct: 187 EFANVATPNEVVVSTRFSMELGSNGGDVHVCMPYTMIEPIRDLLTSAIQGEALEVDKRWV 246

Query: 302 SHLKNELMRSKLELVAVLAETKVPLGEVLAWQKGQSLKLRISPDQTVLVFSKTIPLFAGH 361
             L  ++  +++E+VA LA   V + ++L  + G  + + +  D +V      +P+    
Sbjct: 247 RLLSQQVQTAEVEVVAHLANANVHVSDILNMKVGDVVPIEL--DDSVTARVDGVPVMECA 304

Query: 362 MGQRNDNIAVKIDTDLD 378
            G  N   A++++  L+
Sbjct: 305 YGTFNGQYALRVNRMLN 321