Pairwise Alignments

Query, 390 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 322 a.a., flagellar motor switch protein FliM from Pseudomonas sp. BP01

 Score =  118 bits (296), Expect = 2e-31
 Identities = 74/313 (23%), Positives = 155/313 (49%), Gaps = 11/313 (3%)

Query: 68  LSQEEIDRLLNFGAPEG-----GGPEMSAIQR--LVSSTTVNKDRLPMLDVVFDRMVRML 120
           LSQ+EID LL+ G  +G        E  +I+   L S   + + R+P L+++ +R  R  
Sbjct: 7   LSQDEIDALLH-GVDDGLVQTESASEPGSIKSYDLTSQDRIVRGRMPTLEMINERFARYT 65

Query: 121 NTSLRQFASTNVEASLSKIEWLRYTDFQDAIELPALIGVARAEPWDNQMLVTIDSALIYC 180
             S+      + + ++  ++ +++ ++  ++ +P  + + + +P     L  +D+ L++ 
Sbjct: 66  RISMFNLLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTSLFILDAKLVFK 125

Query: 181 MMDVLLGGRRSRPGRIDGRAYTSIERKMTERMMKVVLQDLGQSFDPLAQVDFVFDRLEVN 240
           ++D   GG   R  +I+GR +T  E ++   ++     DL +++  +  V F +   EVN
Sbjct: 126 LVDNFFGGD-GRHAKIEGREFTPTELRVVRMVLDQCFVDLKEAWQAIMPVTFEYMNSEVN 184

Query: 241 PQFATITRATNAIIRVRIAVEVERRTGHIDIVIPYATLEPVRGKLVQMFMGEKFGHDSVW 300
           P  A I   + A++     +E++   G + + +PY+ +EPVR  L   F  +    D  W
Sbjct: 185 PAMANIVGPSEAVVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQDERW 244

Query: 301 ESHLKNELMRSKLELVAVLAETKVPLGEVLAWQKGQSLKLRISPDQTVLVFSKTIPLFAG 360
              L+ +++   + L A +A  ++ L ++L  Q G  + + + P+  VL  +  +P F  
Sbjct: 245 VKALREDVLDVAVPLTATVARRQLKLRDILHMQPGDVIPVEL-PEHLVL-RANGVPSFKA 302

Query: 361 HMGQRNDNIAVKI 373
            +G    N+A++I
Sbjct: 303 RLGSHKGNLALQI 315