Pairwise Alignments
Query, 827 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 1156 a.a., membrane protein from Azospirillum brasilense Sp245
Score = 107 bits (267), Expect = 4e-27
Identities = 136/536 (25%), Positives = 204/536 (38%), Gaps = 33/536 (6%)
Query: 259 PAKPVPQAAE----PPKPPAPPPIGA--MDLAGWAGDD---FNRTREALQRALDTAQGRA 309
P KP P A PP P P P G DL W D + R+ LQ + A
Sbjct: 565 PPKPSPGGASNTLTPPTDPKPVPSGRRLFDLPAWKKGDLDHYTEARQNLQLNIVNAPDSE 624
Query: 310 RVEAQIALVRFLLARAMDEEGRAALETAASLSPAPDQRYALRILGDAFRAL--DREDAPD 367
R AQ+ L RF LA +E ++ P + R L A R L + + A +
Sbjct: 625 RPRAQLDLARFYLANGFGQEAIGMMDVLQEAQPDLEGWPEFRALRGAARFLAGNTDAAAE 684
Query: 368 DNLFVQLPAGAMPDHHVWRSVALAPTR-WTTAKEGLPIALRRLLDYPADLRSRLLTTLAA 426
D L + +WR+ A W A+ G A L YP + ++L T A
Sbjct: 685 DFAHPNLANNG--EAALWRAAIAADRNDWPAAQAGFKAAAPILNSYPDPILTKLATRAAE 742
Query: 427 AADEAGDSTALNLI---VLEMITVDSKGMADGRLDYFRGRLAELKATPDAALERYDAAAG 483
AA + GD+ + ++E D++ D + Y RG P+ ALE+ A+
Sbjct: 743 AALKTGDAPFAKRLLDRIVERGGTDAEERPD--VQYLRGLYYAQTNEPERALEQLTASYN 800
Query: 484 LRRGPFARRAEVRAIELRRNLGRLDEDGAIKALEALRFAWRGDDVETDALAALGGAYARS 543
+ +A + I L+ GR+ A + L L F WRGD++E +G +
Sbjct: 801 SLDRYYRAKAGLALINLQLAEGRMSPPAAAERLAGLTFTWRGDELEMQIRQRMGEVLIAA 860
Query: 544 GRTDAALDIFGLLGRRFGATARGRD-ALAAGRTLLTAVLDRLERSPPGGLYALALQARHG 602
G+ + T R + R D ++ P + AL L +
Sbjct: 861 GQYADGFNAMKETAALVADTPRAEEITREMSRIFADLYKDGAQKLPT--IEALQLYDQFR 918
Query: 603 RLVTLVDGPDGGLRLRLATLLLRDGYGLEATRILHALTEGATGPRRAELGATLARSLIDG 662
L + + D +R L+ D A + H + +G +A++G LA +
Sbjct: 919 ELTPVGEAGDEVIRQLAERLISVDLLNRAADLLQHQVEYRLSGEDKAQVGTRLASVRLLD 978
Query: 663 GREGEALDVLARTGGSALEPALAERRALLRADAL--LGDGDTVRALDALRGLGGAEAARL 720
+ +AL L + L L R L++A AL LG GD AL L A L
Sbjct: 979 NKPEDALRALELSNVPNLPADLVGERRLMQAKALAELGRGD--EALLLLSEDDSKPANSL 1036
Query: 721 RAKGLFAAGEWRAARSAFAELAATGAEPT------ADDLAL-QGLSAYLAGDAEGL 769
R + A +W AA A +L PT L L + ++ LAGD L
Sbjct: 1037 RVDIAWRAQKWEAAAFALNKLIGPPPPPTQPINPATSQLVLNRAVALALAGDGTNL 1092
Score = 43.1 bits (100), Expect = 9e-08
Identities = 178/792 (22%), Positives = 273/792 (34%), Gaps = 121/792 (15%)
Query: 21 AAPGPAQAAVRAQLG--DHGDYSRLVLSVPKGMEPVAVVDGCVLRISVPDPLRWPLASLR 78
AAP PA++A R + D + SRL + P+G DG + LA +
Sbjct: 157 AAPAPARSAGRVTVSAADTPEQSRLSFTWPEGANYTLRRDGASATLLFDRNGNADLAPVT 216
Query: 79 DSFSRRLSD---FVTADGGRSLTATVPCGARVASFMERRNLIVDVGGPPVPGVKPGAPGD 135
R + + F A+G ++T VP A + R++++DV PG + G
Sbjct: 217 RMALRNIQNVEQFRQANGALAVTFAVPQDAEIKDSKSGRSVVIDVQN---PGTRAGL--- 270
Query: 136 AVEGTPDAVAAVAAPEVGAVSIAGVVEALNPIGTANAAPANLAPPAESPLP---PGERVR 192
A A AP GA + + P AAP PP+ + P P
Sbjct: 271 ------SAGEAAGAPPPGATT-----TTVRPPSAEAAAPQPATPPSAAARPVAAPAPAKE 319
Query: 193 VRGERGEESRDSNAVRPPHPDPLPGGEREKEGERANASLP-VVASLEGEVRDSIQQTLRQ 251
V ++ P PDP + + +A P +V G ++
Sbjct: 320 VAAVSVPAKAEAAKTDPAKPDPAKPDPAKPDPAKAEPQGPTLVFDAGGPASIAVYPRAGH 379
Query: 252 LERMPERPAKPVPQAAEPPKPPAPPPIGAMDLAGWAGDDFNRTREALQRALDTAQGRARV 311
L + ++P PIGA G AG T A++ T R
Sbjct: 380 LYIVFDKPL----------------PIGAGKAIGGAG-----TVGAIEPVPATGGSAFRT 418
Query: 312 EAQIALVRFLLARAMDEEGRAALETAAS-----------LSPAPDQRYALRILGDAFRA- 359
+ + L+ ++ +G + +S + P PD R+L A A
Sbjct: 419 K-----IGPLVWPKIERQGTSWKIMPSSRLTGTPPFELKIDPEPDFLLGARLLVRAADAA 473
Query: 360 ----LDREDAPDDNLFVQLPA--GAMPDHHVWRSVALAPTRWTTAKEGLPIALR-RLLDY 412
L D D V LPA A+P+ H + + L P+ + A+ R +
Sbjct: 474 TVVTLSDPDVGDRLQVVPLPAPGNAIPESHRYADLELLPSYQGVVVRPIADAITVRPVKE 533
Query: 413 PADLRSRLLTTLAAAADEAGDSTALNLIVLEMITVDSKGMADGRLD--------YFRGRL 464
++ + L+ AD AG+ A + + S G A L RL
Sbjct: 534 GVEVTAAGGLHLSPMAD-AGNRPAASAQTASLPPKPSPGGASNTLTPPTDPKPVPSGRRL 592
Query: 465 AELKATPDAALERYDAA-----AGLRRGPFARRAEVRAIELRRNLGRLDEDGAIKALEAL 519
+L A L+ Y A + P + R + R L AI ++ L
Sbjct: 593 FDLPAWKKGDLDHYTEARQNLQLNIVNAPDSERPRAQLDLARFYLANGFGQEAIGMMDVL 652
Query: 520 RFAWRGDDVETDALAALGGAYARSGRTDAALDIF--------GLLGRRFGATARGRDALA 571
+ A + + A G A +G TDAA + F G A A R+
Sbjct: 653 QEAQPDLEGWPEFRALRGAARFLAGNTDAAAEDFAHPNLANNGEAALWRAAIAADRNDWP 712
Query: 572 AGRTLLTAVLDRLERSPPGGLYALALQARHGRLVTLVDGPDGGLRLRLATLLLRDGYGLE 631
A + A L P L LA +A L T D RL ++ G G +
Sbjct: 713 AAQAGFKAAAPILNSYPDPILTKLATRAAEAALKT----GDAPFAKRLLDRIVERG-GTD 767
Query: 632 A-----TRILHALTEGATG-PRRAELGATLARSLID---GGREGEALDVLARTGGSALEP 682
A + L L T P RA T + + +D + G AL L G P
Sbjct: 768 AEERPDVQYLRGLYYAQTNEPERALEQLTASYNSLDRYYRAKAGLALINLQLAEGRMSPP 827
Query: 683 ALAERRALLRADALLGDGDTVRALDALRGLGGAEAARLRAKGLFAAGEWRAARSAFAELA 742
A AER A L GD + + + + L AAG++ +A E A
Sbjct: 828 AAAERLAGL---TFTWRGDELE----------MQIRQRMGEVLIAAGQYADGFNAMKETA 874
Query: 743 ATGAE-PTADDL 753
A A+ P A+++
Sbjct: 875 ALVADTPRAEEI 886
Score = 28.9 bits (63), Expect = 0.002
Identities = 61/281 (21%), Positives = 103/281 (36%), Gaps = 28/281 (9%)
Query: 12 GSTLVLALLAA-----PGPAQAAVRAQLGDHGDYSRLVLSVPKGMEPVAVVDGCVLRISV 66
G ALLAA P V + H + R+V P+ A V+G L +
Sbjct: 13 GFVAATALLAAQIAVTPSAWAVDVPVRAATHKTFGRMVFDWPRQTGYSASVEGNTLVVRF 72
Query: 67 PDPLRWPLASLRDSFSRRLSDFVTADGGRSLTATVPCGARVASFMERRNLIVDVGGPPVP 126
+P+ L + LS G+++T + + SF + +D+ P
Sbjct: 73 DEPINAALDRTVAALPGYLSGVRIGGDGKTVTFDLKRPVTLKSFRNGNAVALDL----TP 128
Query: 127 GVKPGAPGDAVEGTPDAVAAVAAPEVGAVSIAGVVEALNPIGTANAAPANLAPPAESPL- 185
V+ TP A AA A + A A G + A+ P +S L
Sbjct: 129 AVEAPVQSQTQTQTPAQAPAPAAKAETAAAPAPARSA----GRVTVSAAD--TPEQSRLS 182
Query: 186 ---PPGERVRVRGERGEES----RDSNA-VRPPHPDPLPGGEREKEGERANASLPVVASL 237
P G +R + + R+ NA + P L + ++ +AN +L V ++
Sbjct: 183 FTWPEGANYTLRRDGASATLLFDRNGNADLAPVTRMALRNIQNVEQFRQANGALAVTFAV 242
Query: 238 --EGEVRDSI--QQTLRQLERMPERPAKPVPQAAEPPKPPA 274
+ E++DS + + ++ R +AA P P A
Sbjct: 243 PQDAEIKDSKSGRSVVIDVQNPGTRAGLSAGEAAGAPPPGA 283