Pairwise Alignments

Query, 414 a.a., Flagellar hook protein FlgE from Azospirillum sp. SherDot2

Subject, 442 a.a., Protein of unknown function DUF1078 (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (350), Expect = 2e-37
 Identities = 129/455 (28%), Positives = 190/455 (41%), Gaps = 54/455 (11%)

Query: 1   MSLYSAMRSGVSGMSAQSSRLAAISDNISNSQTVGYKRATVDFSTLVTSPGSRSTYTASG 60
           MSL  A  +    M  QS  L  IS N++N  T GYK+   +F TL++   S + +   G
Sbjct: 1   MSLGGAFTNSSMAMITQSHALGQISTNVANINTTGYKQVDTNFKTLLSE--STANFDFFG 58

Query: 61  VQSATHYQMQQDGTILGTSSSTDMAISGNGFFVVGNKASGTPQYSLTRAGSFLPDEA--- 117
           V+   + ++ + G +L T  + D+AI G G F+V  +A  + +   TR GSF    A   
Sbjct: 59  VKPVDYRRVSEQGGLLTTGRNLDVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKET 118

Query: 118 --------GFLHNNAGQYLEAWKLNPDGSMPNVSSSRFDDLQSVNVGNL----------- 158
                    +L    G Y+  W  +             +D ++  +              
Sbjct: 119 VGKVVAGNSYLSTQDGYYVMGWAADQAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTR 178

Query: 159 -VYGGSKTTQMDFSGNLPAQAATGDSF-------TSSPTFYDGLGNPL----DLSMTWTK 206
               G  TT      N+ A A T  S          + T  DG  +      ++S+ +T 
Sbjct: 179 AEADGQATTAAVVRANINALATTTQSLGIPVWGPEVTTTAADGTTSSTWPRQNVSLEFTP 238

Query: 207 AAGP-NQWTLTATGPAGYTV-TGAPVTLTFAATGPYAGKPVDGAGLPLDPMPG--LTVTS 262
            AG  N WT+  + P G T  T  P  +TF           +G G  L P  G      +
Sbjct: 239 VAGTQNSWTVAVSDPNGGTTGTATPAQVTF-----------NGDGTLLSPDDGQLAVAVT 287

Query: 263 PATPTADSFTMSLGNLTQLNG-DYVPTVTGDGAKVGQVTSVDIDDSGKLWVMYDNGARQA 321
            A  T  +  + +  LTQ++G   +  +  +G K G + S +ID SG L   Y NG    
Sbjct: 288 YANGTTGTIAVDIDALTQVSGATQIRNLDTNGYKEGSLISTNIDASGVLSGTYSNGQTLP 347

Query: 322 LYQIPIATVTNPDGLVAQDGNTYTLGADTGTLTL-GAGKQGGAGSVVGS-ALEQSNVDIA 379
           LY++ +      D L A   N Y      G   +  A      G+ V S ALEQS VD+ 
Sbjct: 348 LYKLALTDFQANDHLEAIGKNLYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLG 407

Query: 380 TELVSLIETQRAYSSSATLVRTADEMVEETTRLKR 414
            +   +I TQ AYSSSAT+ RT DEM +  + LKR
Sbjct: 408 DQFSKMITTQTAYSSSATVFRTCDEMSQTVSGLKR 442