Pairwise Alignments

Query, 221 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 201 a.a., RNA polymerase subunit sigma-24 from Cupriavidus basilensis FW507-4G11

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 9/198 (4%)

Query: 25  PDRAKAGLAARGCDDPAAARLSADLVAVAAGDRQAFARLFAHFAPRVKAYMLKLGMPAQR 84
           P  A +  A R  D   A  L+A L   A GDR A  +L+   A ++    L++      
Sbjct: 3   PSPADSSFAPRPAD---ADLLAALLQGAAMGDRHALRQLYDQTATKLFGLALRITNRHDW 59

Query: 85  AEDLAQDTMLSVWRKAQLYDPAKAEAATWVFTIARNLRIDALRRERHPEVS-----DDEL 139
           AED+ Q++ +S+W  A  Y P  A   TW+  I RN  +D LRR+     S     DD L
Sbjct: 60  AEDVVQESFVSIWHHAGDYRPHLAAPMTWMTAIVRNRALDCLRRQAAARTSQTVELDDNL 119

Query: 140 LEH-EDDRPPADELLDGDRRARRLRGALAALTPEQAEVVRLSFFADLAHPAIAERLDVPL 198
            E   D+     EL    ++AR L   L  L   Q + + L++  D++H  ++E+L VPL
Sbjct: 120 GEWLADEAAGPAELALASQQARALNQCLQRLEQPQRQAISLAYLKDMSHSELSEQLQVPL 179

Query: 199 GTVKSRLRLAMAKIRKAL 216
           GT+KS +R  + ++R  L
Sbjct: 180 GTIKSWIRRGLERLRTCL 197