Pairwise Alignments

Query, 221 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 215 a.a., sigma-70 family RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

 Score =  111 bits (278), Expect = 9e-30
 Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 8   LLTHTAGADRAKPDMAKPDRAKAGLAARGCDDPAAARLSADLVAVAAGDRQAFARLFAHF 67
           +L++   A+      A P    A       D   A  L+A L  ++ GDR A   L+   
Sbjct: 1   MLSYQRSAEDPAEQPADPPATSAAARPPSAD---AEELAALLQRISLGDRDALRTLYTRC 57

Query: 68  APRVKAYMLKLGMPAQRAEDLAQDTMLSVWRKAQLYDPAKAEAATWVFTIARNLRIDALR 127
           AP++    L++ +    AED+ Q++ +++WR A  Y P  A   TW+ TI RN  +D LR
Sbjct: 58  APKLFGLALRILVRKDWAEDVLQESFVNIWRHAGDYRPHLAAPMTWMTTIVRNRALDCLR 117

Query: 128 RERHPEVSD---------DELLEHEDDRPPADELLDGDRRARRLRGALAALTPEQAEVVR 178
           R+    V +         D L +H     PAD  L G ++AR L   L  L P+Q +VV 
Sbjct: 118 RQHAERVQESVPLDDAYADVLADHAPG--PADIALAG-QQARALAECLKRLDPKQRQVVS 174

Query: 179 LSFFADLAHPAIAERLDVPLGTVKSRLRLAMAKIRKALG 217
           L++  DL+H  +A+ L +PLGTVKS +R  + ++R+ LG
Sbjct: 175 LAYLRDLSHSELAQSLSLPLGTVKSWMRRGLDRLRECLG 213