Pairwise Alignments

Query, 475 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 402 a.a., carboxyl-terminal protease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (500), Expect = 7e-55
 Identities = 112/318 (35%), Positives = 190/318 (59%), Gaps = 8/318 (2%)

Query: 102 LTEAALDSMLGSLDPYSSFLDAERYRYLREQTQGEFGGLGIEVTMDEESGLIKVVSPIDG 161
           L +AA+  +   LDPYSSFL+ +    L++  +GE+ G G EV  +++   I +++P   
Sbjct: 61  LVQAAIKGIFEHLDPYSSFLNHQELLDLKDSNRGEYFGFGFEVASEKDH--ISIIAPFAN 118

Query: 162 SPAARAGLRSGDLIARIDDVAVKGLNLHDAVARMRGPVGSSVALSIRRPPATD-ANTRVS 220
           SPA +AG+++GD+I ++++      NL D + +++    S  ++ +      D A   V 
Sbjct: 119 SPAEQAGIQAGDIIIKLNNTPTTETNLADILNQIKQHSLSHQSIRLTLKHRNDEAEFEVM 178

Query: 221 LTRAIVKIQPVRYRL-EGNVAYVRIATFNQSTSSALDAAIEDMRRQSKGRLTGAVIDLRN 279
           L  + + IQ V  +L +GN+ YVR+++F + ++  +   +  + +    +LTG ++DLRN
Sbjct: 179 LKPSTITIQSVASKLLDGNIGYVRLSSFQEDSTEDM---VRTLSQWQGTQLTGLILDLRN 235

Query: 280 NPGGLLEQAVQVADRFLETVDIVSVRGRDPEESRTYRGTAGDLMAGLPVVVLINSGSASA 339
           NPGGLL+QA+ +AD FL    IVS  GR  + +  Y  +   ++A +P++VLIN GSASA
Sbjct: 236 NPGGLLDQAINIADLFLAKGRIVSTSGRFFDANSDYYASPQTMLANVPMLVLINKGSASA 295

Query: 340 SEIVAGALQDHHRALLFGSRSYGKGSVQT-ISSLSADTGIRLTTARYYRPSGALVDCFGV 398
           SE++A ALQ++ RA L G  S+GKG+VQ+ I  L+    ++LT A+Y  P G  +   G+
Sbjct: 296 SEVLAAALQENGRAKLLGETSFGKGTVQSLIPILNNGNAVKLTIAQYNTPKGENIHDIGI 355

Query: 399 SPNLEVKPTHGSTEETHP 416
            P+++V    GS ++  P
Sbjct: 356 KPDIKVVSETGSNQKNMP 373