Pairwise Alignments

Query, 350 a.a., Hydrogenase maturation factor HypB from Azospirillum sp. SherDot2

Subject, 264 a.a., hydrogenase accessory protein HypB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  194 bits (492), Expect = 3e-54
 Identities = 113/275 (41%), Positives = 148/275 (53%), Gaps = 27/275 (9%)

Query: 66  HNDHGHDHEHGHGHGHDHSHVHDHSHDHGHHHHGHDHHRPDRPDAIDGGAALNQPRLVTI 125
           H+    +H+H  GH HDHSH+H   H +                       LN  + +++
Sbjct: 12  HSAIQQEHDHHTGHSHDHSHIHQQLHTNPQ---------------------LNDKKTLSV 50

Query: 126 ERDILAKNDGLAAVNRRRFADRGVFVLNLMSSPGSGKTTLLTRSLTDLKGRFPVAVIEGD 185
              IL KND  AA NR  F    +   NLMSSPGSGKTTLL       K  +  AVIEGD
Sbjct: 51  IHKILDKNDVEAAHNRAHFEAHHITAFNLMSSPGSGKTTLLEHLKEYTKLNY--AVIEGD 108

Query: 186 QQTSFDADRIRATGTPAVQVNTGKGCHLDASMVAQAADKLAADGQFAGDGVLFVENVGNL 245
            +TS DADR+ A G  A Q+ TG  CHLDA MV  A   L  +G      + FVENVGNL
Sbjct: 109 LETSRDADRLIAKGIKAHQIQTGSACHLDAFMVHGALHHLPLEGV----DICFVENVGNL 164

Query: 246 VCPAGFDLGETHRVVVLSVTEGEDKPLKYPDMFVRADLLVVNKIDLLPHLTFDVERMIGY 305
           VCPA +D+G    +V+LSV EG+DK  KYP MF RADL+++ K DLLP+  F V+     
Sbjct: 165 VCPASYDVGTHKNIVLLSVPEGDDKIEKYPVMFRRADLVLITKCDLLPYFDFSVDEAKTQ 224

Query: 306 AQRLNPSLAVIQLSATTGQGLEEWYDWIADGLAEA 340
            ++LNP+  ++++S   G  +     W+   L  A
Sbjct: 225 LKKLNPNTQILEVSIKDGDSMHAVAAWLNSNLRPA 259