Pairwise Alignments

Query, 249 a.a., HTH-type transcriptional activator RhaR from Azospirillum sp. SherDot2

Subject, 253 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  154 bits (390), Expect = 1e-42
 Identities = 94/247 (38%), Positives = 133/247 (53%), Gaps = 7/247 (2%)

Query: 3   SPHRPTVSTRSYDGHERRHAHDHHQIVLPIAGTLDMEVGGACGRVGDGRGVLVADGVPHS 62
           +P    +  RSY      H HD  Q+VLP+AG L +++GG  GR     G  V  G  H+
Sbjct: 10  APPLAQLHLRSYRDESLAHRHDFPQLVLPLAGHLALDIGGREGRADAATGAFVEPGARHA 69

Query: 63  FRSGGANRFVVLDV-PAAGLVPEAAVRACDAFFAIDGALDGLVRYLAAEAADRPLDPVLA 121
            R+GG NR +VLD+ PA     +    A   F  +  A   LV ++A   A     P + 
Sbjct: 70  TRAGGENRSLVLDLAPATVNALQLEQLAQRPFLPLSVAAGKLVEFMAVSLAQARSSPAML 129

Query: 122 HHSAGLLLRALEARQPPRPVSPVSKDPIDRALALMAERCGEPLTVAELAEAAGLAPSRFH 181
            H   LLL  L  R      +P +   + R +A +  +   P TVA++AEAA ++PSR H
Sbjct: 130 QHWVPLLLDTLAQR------TPQALSRLRRMMAQVEAQVAHPWTVAQMAEAAAISPSRLH 183

Query: 182 ERFRARTGSTPARLLADLRLDRAEALLRDGRLPLAEVALAVGFSDQSALTRSLRRRRGTT 241
           E FRA   S+P   LA++R+ +A  LLR   LPLA+VA   G++DQSALT ++RR RG T
Sbjct: 184 EWFRAELDSSPRAWLAEVRMAQACQLLRTSALPLAQVAQRCGYADQSALTHAMRRLRGVT 243

Query: 242 PGAVRRS 248
           P + R++
Sbjct: 244 PASYRKN 250