Pairwise Alignments

Query, 204 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 192 a.a., cold shock transcription regulator protein from Sinorhizobium meliloti 1021

 Score = 93.6 bits (231), Expect = 2e-24
 Identities = 61/183 (33%), Positives = 84/183 (45%), Gaps = 27/183 (14%)

Query: 19  DIRATVKWFNATKGFGFVTPDDGSPDAFLHSTVLQFCGHDSLPEGATITCDLSRGPKGPQ 78
           +I   +KWF+  KGFGF+ PD+G  D  LH T L+  G+ ++ EGA +   + +  +G Q
Sbjct: 25  EITGVIKWFDVAKGFGFIVPDNGMQDVLLHVTCLRRDGYQTVLEGARVVALIQKRDRGYQ 84

Query: 79  VATIHAVDTSTAAPSRPSRAPRERDSWGNDGGYGGGNSYGGGSRGGYGADSYGDSDGGEV 138
              I ++D STA    PS+ P  R                              + G E 
Sbjct: 85  AFRILSMDQSTAV--HPSQLPPVRTH-----------------------VQVTPTSGLER 119

Query: 139 VDGTVKWFNVSKGFGFIAPSTGGKDIFVHIRALERSGINGLDDGAQVRVTIRQGAKGPEA 198
           V   VKWFN +KGFGF+    G +DIFVH+  L R G+  L  G  V      G KG  A
Sbjct: 120 V--LVKWFNRTKGFGFLTRGEGTEDIFVHMETLRRFGLTELRPGQVVLCRFGDGEKGLMA 177

Query: 199 QRV 201
             +
Sbjct: 178 AEI 180



 Score = 58.9 bits (141), Expect = 6e-14
 Identities = 28/63 (44%), Positives = 34/63 (53%)

Query: 21  RATVKWFNATKGFGFVTPDDGSPDAFLHSTVLQFCGHDSLPEGATITCDLSRGPKGPQVA 80
           R  VKWFN TKGFGF+T  +G+ D F+H   L+  G   L  G  + C    G KG   A
Sbjct: 119 RVLVKWFNRTKGFGFLTRGEGTEDIFVHMETLRRFGLTELRPGQVVLCRFGDGEKGLMAA 178

Query: 81  TIH 83
            IH
Sbjct: 179 EIH 181