Pairwise Alignments

Query, 413 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 388 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (437), Expect = 1e-47
 Identities = 106/317 (33%), Positives = 171/317 (53%), Gaps = 13/317 (4%)

Query: 43  RLIGRLGLVQIDSVNVLVRSHYLPLFSRLGPYEAALLDRLAYGGKRRALFEYWGHEASLI 102
           +LI  LG VQIDS+NV+ R+H+  L SR+  Y+  +LD     G+   +FEYW H A+ +
Sbjct: 29  QLIACLGYVQIDSINVVERAHHHVLHSRMPQYQPQMLDTALAQGE---IFEYWSHAAAYL 85

Query: 103 PVEQQPLFRWRMARAERGEGTYGALARFAVERRPYIESVLAEVASRGPMGASELSEAGRG 162
           P+     +R+ + R ++ +   G    F  +    ++ V A + + GP+ AS+       
Sbjct: 86  PIAD---YRFSLQRKQQLQN--GGKHWFEPDDNA-MQEVRARIRAEGPLKASDFEHTEGK 139

Query: 163 AGGWWGWSDGKRALEYLFWAGLVTTAGRRGFERLYDLPERVLPAAVLDTPTPEEEEAQRA 222
            G WW W   K+ALE LF  G +    R  F++ YDL ERVLP+ + +T  P + E  R 
Sbjct: 140 NGAWWDWKPAKKALEQLFMRGELMVVRREKFQKCYDLTERVLPSHI-NTLAPSDSEFARH 198

Query: 223 LLRIAARAHGVATERDLRDYHRLDVADARLRIAELVEAGDLLPVTVEGWDRIAYVTPDLR 282
           L+     AH   +   +    +   A+   ++A +   G+L     EG  +  +  P+L+
Sbjct: 199 LISRYLDAHAFGSAAQIAYLRKGIKANVNQQLAAMQSQGELASFKAEG--QWYFYRPELQ 256

Query: 283 IPRKAVSRA-LLSPFDSLVWERQRTERLFGARIRLEIYTPAHKREHGYYVLPFLMDERIA 341
           I     +R  LL+PFD+L+ +RQR ++ F    ++E+Y PA KR++GYY L  L  +R  
Sbjct: 257 ITAAMPNRVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKRQYGYYSLAILWRDRFV 316

Query: 342 ARVDLKSDRKATTLLVQ 358
            RVD+K+DR++  LL+Q
Sbjct: 317 GRVDVKADRQSGLLLLQ 333