Pairwise Alignments

Query, 324 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 621 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

 Score =  194 bits (492), Expect = 6e-54
 Identities = 125/312 (40%), Positives = 172/312 (55%), Gaps = 14/312 (4%)

Query: 19  AGTAVIAAILLLIAVAAPFVLYPV-----FLMKVLCFALFACAFNLLIGFAGLLSFGHAA 73
           A   V  A++LL  V AP VL P+      L +VL + L    F++L G  GLLSFG AA
Sbjct: 4   ASRYVPEALVLLTLVLAPVVLNPLGFSTDLLTRVLNWGLIGLGFDILFGLTGLLSFGQAA 63

Query: 74  FFGGAAYIAAHVVKEWGWAPEF-GLIAATAVAGLMGLVFGLIAIRRQGIYFAMITLALSQ 132
           F+G   ++ A+++        +  L+  TA AG+ GLV G  A+RR GIYF MITLA  Q
Sbjct: 64  FYGVGGFVTAYLLVSGAVGSVWLALLVGTASAGVFGLVVGWFAVRRIGIYFTMITLAFGQ 123

Query: 133 MVFFLALQ--LPFTHGEDGIQGVPRGTL-FGL--FDLGQPLTMYYTVLAIFVAGFALIWR 187
           M +F+       +T GE+GI GVP  TL FG   F +   L MY     IF  G+ L  R
Sbjct: 124 MAYFIENSPLSDYTGGENGIPGVPAPTLGFGADAFRISAGLPMYVLFAVIFFLGYVLARR 183

Query: 188 TVHSPFGQVLKAIRENEPRAVSLGYRTDRYKLVAFVLSASLAGLAGGTKALVFQLASLTD 247
            V SP G +L AI+EN  R   LG+    YKL AFV++A  AGLAGG             
Sbjct: 184 IVRSPVGAILLAIKENTGRVAMLGHDVPAYKLTAFVIAALYAGLAGGLLGSFQSYMPPDA 243

Query: 248 VTWQMSGEVVLMTLLGGMGTLFGPVVGAGLVVTLESYL---ASTSLPVPVVIGCIFVVCV 304
            + + SG++V+ T++GG GTL GP+VGA + + L   L      ++   +V+G  F+V V
Sbjct: 244 FSLETSGQLVVQTIVGGAGTLIGPLVGAAVWLWLRDNLQLIPGFAMLWKLVLGIAFIVLV 303

Query: 305 LVFRRGIVGELL 316
           +  RRG+ GE++
Sbjct: 304 IGLRRGVCGEIV 315