Pairwise Alignments

Query, 304 a.a., RCS-specific HTH-type transcriptional activator RclR from Azospirillum sp. SherDot2

Subject, 328 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  268 bits (685), Expect = 1e-76
 Identities = 151/304 (49%), Positives = 188/304 (61%), Gaps = 14/304 (4%)

Query: 1   MRLYGVRYRRLQFAPPFGIRFGRDEGRAQFHFVACGTAILRGRTGMLHELHAGDAVLLPR 60
           +RL GV Y R +   P+GI F   E  A+FHF+ CG   LR   G   EL  GDAVLLPR
Sbjct: 24  LRLDGVDYVRCELTAPWGISFPAQEA-ARFHFI-CGDCWLRVADGDWIELKRGDAVLLPR 81

Query: 61  GGAHDLVSDADGQGLD-LGGFDEAALCETVGSIKSCPADTC---RSKDTVIFSGCMEFDL 116
           GGAH L S A G+ L  L  +    +C        C  D C   R K T++F G + F++
Sbjct: 82  GGAHALAS-APGEKLSPLEAYSVEEVCH-------CVYDVCGGGRGKTTILFCGSLRFNM 133

Query: 117 GAMHPLIGLMPEVMLVGTLLDRYPEILPMLEAMEREARTERAGFAGILARLADVVSAFIV 176
            AMHPL+ +MP+VM +  L    P I  ML+AM RE    R G  G+LARLADV++A I+
Sbjct: 134 DAMHPLLRMMPDVMRIDALTASEPAIPHMLDAMAREVGASRVGSGGVLARLADVLAALII 193

Query: 177 RGWVECGCGDARGWVEALRDPRLGRVIAALHRDPGRDWTVAQLAAEMGSSRSVFAERFLA 236
           R WVE GCG+  GWV A+R P LGRVIAA+H DP + WTV  LA  MG+SRS FA++F A
Sbjct: 194 RSWVEHGCGNTNGWVAAVRHPGLGRVIAAMHLDPEKTWTVDSLAKLMGASRSGFAQQFAA 253

Query: 237 VTGMTPLQYVTELRMRLAAQWIGRENMPIETAAYRLGYGSQAAFSRAFKRVTGQPPGAAR 296
           V G TP +Y+T++RM  A QW+ R+ M I   A RLGY S+A+FSRAFKRV G PP   R
Sbjct: 254 VVGETPARYLTQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRAFKRVIGLPPSHYR 313

Query: 297 NRSP 300
              P
Sbjct: 314 GSEP 317