Pairwise Alignments

Query, 207 a.a., ECF RNA polymerase sigma factor RpoE from Azospirillum sp. SherDot2

Subject, 215 a.a., DNA-directed RNA polymerase sigma-70 factor from Ralstonia solanacearum IBSBF1503

 Score = 92.0 bits (227), Expect = 7e-24
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 11/202 (5%)

Query: 12  TLNKDGAGSP----DADRADADQFGGLVHAVAQDRDRTAFAALFRHFAPKILHYCLKLGA 67
           T  +D   SP     A  ADA+    L+  +    DR A   L+   APK+    L++ A
Sbjct: 12  TAGQDAGQSPAAAGHARGADAEALAALLQRIGLG-DRDALRTLYACCAPKLFGLALRILA 70

Query: 68  DRSTAEELVQDVMLTVWLKAASFDPAQATVGTWVFTIARNRRIDRLRKEMRPAP------ 121
            +  AE+++Q+  + +W  A  + P  A   TW+ TI RNR +D LR++           
Sbjct: 71  RKDWAEDVLQESFVNIWRHAGDYRPHLAAPMTWMTTIVRNRALDCLRRQRAERVQASVPL 130

Query: 122 DPDDPAMTPASFATPEETAQMVQSSRQLQDAIETLAENQSEVLRRSYFLEQTHEEIAEDT 181
           D  D A        P + A   Q +R L + ++ L   Q EV+  +Y  + +H E+A+  
Sbjct: 131 DETDAAALVDHAPGPADLALAGQQARALAECLKRLDPKQREVVSLAYLRDLSHSELAQTL 190

Query: 182 EVPLGTVKTRLRLALSHLKRSM 203
            VPLGTVK+ +R  L  L+  +
Sbjct: 191 SVPLGTVKSWMRRGLDRLRECL 212