Pairwise Alignments

Query, 438 a.a., Hemolysin secretion protein D, plasmid from Azospirillum sp. SherDot2

Subject, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (589), Expect = 4e-65
 Identities = 153/441 (34%), Positives = 243/441 (55%), Gaps = 28/441 (6%)

Query: 4   PPSPFARAVSLLIVAFAVIAVAWAWIGHIDITAVTRGRLIPSDRNKLVQTLEPGIVRAIR 63
           PPSPFAR  +L +    + A+ WA+ G +D+ A   GRL+ S R++++Q+ E   + +I 
Sbjct: 49  PPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIH 108

Query: 64  VTEGQQVEQGAVLLELDPTDSAADAGRAEWELAVAETEASRLRAALADRR-SFDPPPTAD 122
           V +GQ+VE+GA LL LD      D  R   +      E  R R  L D+  + DP  TA 
Sbjct: 109 VRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTA- 167

Query: 123 AALVALQRSIL-VNQLTARDAALDAIGSQERQRRAEIAALAAEKARLGATLPL---IREQ 178
             L A Q++++  N L+ ++     + S   + +    + AA ++ + A L L   I ++
Sbjct: 168 --LPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQR 225

Query: 179 VQAKRNLSQRGYSPRFDLLELEKELAEVEYGAVAAKNREAEA-EAALKGLADERRRVTAE 237
           + A++ L+Q       + LE EKEL E +   VA +  E E  ++  + L +      A+
Sbjct: 226 LAARKKLNQVKVIGHVEYLEQEKELLEAQR-QVAQQRAELEVLKSQYESLEERLTGFKAQ 284

Query: 238 FDGKAMADLADAEKRAAALRQELTKAARRRERQLLTAPVGGMIQQLAVHTVGGVVTAAEP 297
              + +     A  + A+L QEL+K   R + +++ +PV G +QQL+V+T+G V+  A+ 
Sbjct: 285 KQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQN 344

Query: 298 LMVIVPANRTLIVEVQVENKDIGFLHPGMPAEIKVDAFPFTRYGLLPGTVLAVSHDVILP 357
           LM+IVP NR    EVQ+ NKD+GF++PG    +KVDAFP+TRYG +   +L++S D    
Sbjct: 345 LMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRD---- 400

Query: 358 PDGAAARTGAAEPAATAERDGPKFSARIALERTAIRGETGEDIALAPGMAVTAEVKTGRR 417
                        + T E+ G  F A+I L+   I  + G+ + L PGM+V AE+KT +R
Sbjct: 401 -------------STTDEQLGLVFPAQIQLKTNHIMID-GQTVELTPGMSVVAEIKTDKR 446

Query: 418 RVLDYLLSPVLAHVHEAMRER 438
           RV+DYLLSP+  +  EA+RER
Sbjct: 447 RVIDYLLSPIQEYQAEALRER 467