Pairwise Alignments

Query, 401 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 92/355 (25%), Positives = 147/355 (41%), Gaps = 23/355 (6%)

Query: 33  EFATRAAEHDAAASFPFKNFERLAAFGLPALVTPEAAGGKGGGLRDALAVVNGIASGEPS 92
           E A  AA+ D    FP    ++    G  +L +PE+ GG G    DA  +   ++ G  +
Sbjct: 23  ELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLSRLDASIIFEELSKGCTA 82

Query: 93  TALVLVLQYVIHNQL-WRGSAW-PEALREHIARSAATDGALINILRVEPELGTPHRGGLP 150
           T  +L     IHN   W  + W  + LR+  +    T   L +    EP  G+       
Sbjct: 83  TTAMLT----IHNMATWMVTTWGTDTLRQAWSEPLTTGQMLASYCLTEPGAGSD--AASL 136

Query: 151 ATVARKVPGGWRLSGTKIYSTGIPALSWLGVWARTDDAEPL-VGTWVVPRGTGLAEQGIE 209
            T A +    + +SG+K++ +G  +   L V  RT  A P  +    +P  +    +GI 
Sbjct: 137 QTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGISAIAIPADS----EGII 192

Query: 210 VRETWNHIGMRASGSHEVVFRDVFVPDGHA-GELRPPAGWAAPDAVATAWMAALFSGVYD 268
             +  + +G  A  +  V F +V VP  +  GE      +A           A  S    
Sbjct: 193 YGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGGRINIATCSV--- 249

Query: 269 GIARSARDWLVGFLHARKPTGLNGASLATVPRLQEALGGIEALLLTNRILLHSLSAAVDG 328
           G A++A +    +++ R+  G     LA    LQ  L  +   L+  R ++   +  +D 
Sbjct: 250 GTAQAALERATQYMNERQQFG---KPLAAFQALQFKLADMATELVAARQMVRLAAFKLDS 306

Query: 329 GTPPSQSDALLVKYTVTNNAIDAVARALEITGNPGLSRDNPLERHHRDVLCARVH 383
           G P + +   + K   T+        AL+I G  G  R+ PLERH RDV   RVH
Sbjct: 307 GDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDV---RVH 358