Pairwise Alignments

Query, 300 a.a., Farnesyl diphosphate synthase from Azospirillum sp. SherDot2

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 4e-55
 Identities = 112/264 (42%), Positives = 154/264 (58%), Gaps = 2/264 (0%)

Query: 38  VFDAMRYGCLNGGKRLRPFLVMQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDD 97
           + +AMRYG L GGKR RP+LV  +  + G         A+AVE +H+YSL+HDDLPAMDD
Sbjct: 30  LIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDD 89

Query: 98  GELRRGRPTCHRQFDEATAILAGDGLLTLAFEVLAD-PATHEDPNIRCQLVTALAKAAGG 156
            ELRRG+PTCH QFDEATAIL GD L TLAF +LA+   +      R  ++ ALA+A+G 
Sbjct: 90  DELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGA 149

Query: 157 HGMVGGQMLDLIAEHETFDLGTTTRLQRMKTGEMIAFSCEAGGI-LGKANPPQRTALRAY 215
            GM  GQ LDL AE+    L     + R KTG ++  +   G +  G+        L  Y
Sbjct: 150 QGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRY 209

Query: 216 AHDLGLAFQIVDDLLDVEGTAEETGKTVGRDAQAGKATFVSILGRDRARAQAEMLASQAS 275
           A  +GLAFQ+ DD+LD+    E  GK  G D +  K+T+ ++LG + A+ +A  L  +A 
Sbjct: 210 AEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269

Query: 276 QHLDIFDGRADMLKAVADFVVARR 299
             L+      + L+  A +VV R+
Sbjct: 270 LALEAIPYNTEHLEEFARYVVERK 293