Pairwise Alignments

Query, 298 a.a., Glycine cleavage system transcriptional activator from Azospirillum sp. SherDot2

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella amazonensis SB2B

 Score =  184 bits (468), Expect = 2e-51
 Identities = 117/299 (39%), Positives = 157/299 (52%), Gaps = 7/299 (2%)

Query: 6   RLLPSMSMLSAFEAAARTGSFTAAAAELSLTQGAVSRQIKALEDQIGTALFIRKGQRVTL 65
           R LP ++ + AFEAAAR  SFT AA EL +TQ AVS QIKALED +G  LF RK + + L
Sbjct: 3   RRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLL 62

Query: 66  TPTGALYADPIRDALRQIAAATVRTIAAPKGGVLNLAILPTFGTRWLVPRLPAFQTAHPQ 125
           T  G  Y   I+D   Q++ AT R +A    G L +++ P+F  +WLVPRL  F   +P 
Sbjct: 63  TEEGQSYFLDIKDIFTQLSDATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKNPD 122

Query: 126 VTIHFTTKLAPFDFRLHDLDAAIHYGFGDWPDAVCDHLLDEEVLPVCSPAFLKAH-PVTE 184
           + +      +       D+D AI+YG G WP    D L +E ++PVCSP  L  H P+  
Sbjct: 123 IDVRIKAVDSEEGSLTDDVDVAIYYGQGSWPGLRADKLRNEVLIPVCSPMLLNGHKPLET 182

Query: 185 PGDLLSLPLLHTSTRADAWNEWLSAQGLPP-RPGAGMVFEQFATTAQAAEAGLGVALLPT 243
           P DL    LLH  +R D W  W    G+       G +F   +   QAA  G GVAL  +
Sbjct: 183 PADLKHHTLLHDMSRHD-WQAWFRQCGVTDVNVNQGPIFSHSSLVLQAAAHGQGVALGYS 241

Query: 244 LLVRAELDDGTLLPAIDRPHRSARAYYLVHPRGKANHPPFAAFRQWLL----AEARGEV 298
           +L R ++  G L+        S  AYYLV  +  A      AFR+W+L     E+R E+
Sbjct: 242 VLARPDIKAGRLVVPFQEVLVSKDAYYLVCQQNHAELGKIVAFREWMLDMFAEESRSEL 300