Pairwise Alignments

Query, 482 a.a., HTH-type transcriptional regulator RamB from Azospirillum sp. SherDot2

Subject, 474 a.a., Transcriptional Regulator, XRE family (NCBI) from Rhodospirillum rubrum S1H

 Score =  453 bits (1165), Expect = e-132
 Identities = 226/471 (47%), Positives = 313/471 (66%), Gaps = 2/471 (0%)

Query: 3   KKLFLGYKLRRLREQRGLTQASLAKTLELSPSYLNQLENNQRPLTLPVLMRIAATFELEL 62
           +K F+G +L+RLRE+RGLTQA+LA+TLE+SPSYLNQ+E NQRPLT+PVL+RI A F +++
Sbjct: 2   RKAFMGMRLQRLREERGLTQAALARTLEISPSYLNQMERNQRPLTVPVLLRINAAFGVDV 61

Query: 63  SAFLEDEDSRLVSDLREALADPLFAGAPLTAAELRSVVGSSPELARRVLSLHQAYQKLHE 122
             F EDE++RL++DLRE L++    G  +T +E++ +    P +   +++LH+  +   E
Sbjct: 62  QLFSEDEEARLIADLRETLSES-GTGDTITLSEIKGLAADMPMIGHALITLHRRARGATE 120

Query: 123 RVQSLTDSLSNSEQGDSFAGPQFPYEEVRDYFHYCNNYIGPLDEAAERLWDTEKIHSGSL 182
           R++++  SL    +    A P  PYEEVRD+F+  +N++  LDEAAERL+    +  G++
Sbjct: 121 RLEAMAASLGVPAESLGVAPPPMPYEEVRDFFYDRHNHVAELDEAAERLFLDADLGIGAM 180

Query: 183 LNELAAYLKRRHDVRVKIVA-DEAGDTAMRSYDATTGTLRLSALLTSSSRAFHMANQIAL 241
              L   L+ RH +RV I   D+      R +D     L LS  L +  RAF MA Q+A 
Sbjct: 181 DISLERLLRDRHGIRVVIQGRDDMAGNEHRRFDGDQRVLYLSRALEAGQRAFQMATQLAF 240

Query: 242 LEFGDQIDDLVEQAKFSSEDARSICRVGLANYFAGALVLPYRAFAAQARALRHDVEQLQS 301
           L+    +D LV   + +S +AR++ R+GLANY+AGAL+LPY  F + A  LR+DV+ L  
Sbjct: 241 LDHSALLDALVGSPRLASAEARALARIGLANYYAGALILPYGEFLSAAERLRYDVDLLGE 300

Query: 302 RFSASFEQVCHRLSTLQRPGARGLPFYFVRVDMAGNITKRHSATRFHFARFGGACPLWNV 361
            F    E +CHRLSTLQR GARG+PF+F+RVD AGNI+KR SAT FHF+R GG CPLWNV
Sbjct: 301 MFGVGVETICHRLSTLQRSGARGVPFFFIRVDRAGNISKRQSATDFHFSRVGGTCPLWNV 360

Query: 362 HEAFAQPGKILVQFAQMPDRTAYISIARTVTKRGGAYLKPSRQFAVGLGCEASHAPELVY 421
           + AFA PG++L Q AQMPD   Y+ +ARTV    G +  P + FA+GLGC+  HA  LVY
Sbjct: 361 YAAFASPGRVLTQIAQMPDGRTYLWVARTVCHNRGGFGVPGKTFAIGLGCDLRHADRLVY 420

Query: 422 AAGIDITDMKAAVPIGVNCRLCERTDCQQRAFPPIGSELRVNEHHRSFVPY 472
           A G++++D   A PIG  C++CER  C QRAFPP+G  L V+E    F PY
Sbjct: 421 ARGLNLSDASTATPIGAGCKVCERPACPQRAFPPLGKGLIVDERRSLFEPY 471