Pairwise Alignments

Query, 416 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

 Score =  379 bits (972), Expect = e-109
 Identities = 198/409 (48%), Positives = 274/409 (66%), Gaps = 7/409 (1%)

Query: 2   TAAFVAGADVPLKRRLKRAERARQFRALGLVLPLLAFLLFTFVVPLAGMIWKSADDWEVP 61
           T   +A    PLKR L RA R ++ RAL L+ PLL F+L TF++P+A M+++S ++  V 
Sbjct: 7   TGPVLAADGTPLKRSLARALRMQKIRALMLIAPLLLFVLLTFILPIADMLFRSVENKIVS 66

Query: 62  QVMPQTVAALEHW--NGQGLPDEAAFAALAADMRTAREAGTLAVAAKRLNYIVNGYRTTL 119
             +P+TV AL+ W  N    PDEA FAALAAD++ A +  T      RLNY   G  +  
Sbjct: 67  DTLPKTVVALKDWDANSGETPDEAIFAALAADLQVAAQEKTHTRVGSRLNYENPGISSLF 126

Query: 120 LSTARKLK--EQPAPGTAKETMIGLSPAWGERESWTAIKSASGPVTSYYLLAAVDLTRNA 177
               RK+K  +    G  +E  I +   W + E W  I++ SG  T+ Y L A D  + A
Sbjct: 127 RKAGRKVKRWDLAEDGPFREQFIKIDEDWADPEVWRTIQTYSGAYTNGYFLNAADFQKGA 186

Query: 178 DGAIVAAPPDQAIYRDVFIRTFTIGFGVTALCLILGFPVAYLLANLPTGRSNLLMIFVLL 237
           +GA +  P ++ IY  +F+RT  +   +T  C++LG+PVA++LANLP+  +NLLMI VLL
Sbjct: 187 EGAELR-PENERIYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLL 245

Query: 238 PFWTSLLVRTCAWIVILQSEGIVNGSLQWLGVIDEPMRLIY--NRFGVYMAMTHVLLPFM 295
           PFWTSLLVRT AW V+LQ +G++N +L WLG++ +  RL+   N+FG  +AMTH+LLPFM
Sbjct: 246 PFWTSLLVRTSAWKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFM 305

Query: 296 ILPLYSVMRGISPAYMRAAASLGAPPATAFMRIYLPQTIPGIGAGCLLVFILAIGYYITP 355
           ILP+YSVM+ I+P+Y+RAA SLGA   TAF R+Y PQ++PGIGAG +LVFILAIGYYITP
Sbjct: 306 ILPMYSVMQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITP 365

Query: 356 ALVGGAADQMISSFIAFYTTETVNWGLASALGAVLLLSTLVLALVYGKL 404
            LVGG     IS+ IAF+ ++++NWGLA+ALG++LL+  L L   Y K+
Sbjct: 366 ELVGGTKGVFISNRIAFHISQSLNWGLAAALGSILLVVVLALYWAYDKI 414