Pairwise Alignments

Query, 416 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 427 a.a., polyamine ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  385 bits (989), Expect = e-111
 Identities = 194/399 (48%), Positives = 271/399 (67%), Gaps = 6/399 (1%)

Query: 13  LKRRLKRAERARQFRALGLVLPLLAFLLFTFVVPLAGMIWKSADDWEVPQVMPQTVAALE 72
           LKR L+ A+  ++  AL L+ PL  FLL TFV P+  ++ ++ ++ EV   +PQTVA L 
Sbjct: 22  LKRDLRAAQTRKRLGALALIAPLAIFLLLTFVAPIVALLQRAIENPEVAATLPQTVAVLA 81

Query: 73  HWNGQGLPDEAAFAALAADMRTAREAGTLAVAAKRLNYIVNGYRTTLLSTARKLKEQPA- 131
            W+ +    + A++ALAAD+  A+E  T    A+RLN  + G R+ ++ T R +  + A 
Sbjct: 82  KWDRKSALPDQAYSALAADLTRAKEDTTAGNLARRLNIELAGSRSLVMGTTRAMPLRDAE 141

Query: 132 -----PGTAKETMIGLSPAWGERESWTAIKSASGPVTSYYLLAAVDLTRNADGAIVAAPP 186
                P  A++ +I L+  WG+ + W  I       + YYLLA++DL +N  G I AAPP
Sbjct: 142 GKPLSPAAARDAIIALNAQWGQPDVWRVIAQNGSVYSPYYLLASLDLRQNVFGDIEAAPP 201

Query: 187 DQAIYRDVFIRTFTIGFGVTALCLILGFPVAYLLANLPTGRSNLLMIFVLLPFWTSLLVR 246
           + AIYR +F RT  +   VT + L+L +P+AY L+ +P  R+NLLMI VL+PFWTS+LVR
Sbjct: 202 ESAIYRTIFGRTLWMSAVVTCITLLLAYPLAYWLSTMPERRANLLMILVLIPFWTSILVR 261

Query: 247 TCAWIVILQSEGIVNGSLQWLGVIDEPMRLIYNRFGVYMAMTHVLLPFMILPLYSVMRGI 306
             AWIV+LQSEG+VN +L   G+   P+ L++NR GVY++MTH+LLPFMILPLYSVM+ +
Sbjct: 262 VAAWIVLLQSEGLVNKALMLAGLTQSPLELVFNRVGVYISMTHILLPFMILPLYSVMKSV 321

Query: 307 SPAYMRAAASLGAPPATAFMRIYLPQTIPGIGAGCLLVFILAIGYYITPALVGGAADQMI 366
              Y++AA SLG+ P  AF R+Y+PQT PGIGAG LLVFI+A GYYITPAL+GG  +QM+
Sbjct: 322 PATYLKAAVSLGSHPFAAFWRVYVPQTYPGIGAGVLLVFIMAGGYYITPALLGGPNEQMV 381

Query: 367 SSFIAFYTTETVNWGLASALGAVLLLSTLVLALVYGKLA 405
           S FIA++   T+NWG+A ALGA+LL +TLVL  VY + A
Sbjct: 382 SYFIAYFINTTINWGMACALGALLLAATLVLYGVYRRFA 420