Pairwise Alignments

Query, 352 a.a., Adenine DNA glycosylase from Azospirillum sp. SherDot2

Subject, 365 a.a., A/G-specific adenine glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  220 bits (560), Expect = 5e-62
 Identities = 131/307 (42%), Positives = 180/307 (58%), Gaps = 17/307 (5%)

Query: 9   ARRLLSWYDRH-RRDLPWRAKPGETADPYRVWLSEIMLQQTTVPAAAPYFRNFTERWPTV 67
           A R+++WYD H R+ LPW+    +   PYRVW+SEIMLQQT V    PY++ F +R+P V
Sbjct: 8   ATRIVNWYDNHGRKTLPWQ----QDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNV 63

Query: 68  RDLADSPLDDLLVAWAGLGYYARARNLHKCARVVVDRHGGRFPGNEAALLELPGIGAYTA 127
             LA++P D++L  W GLGYYARARNLHK A+++ D + G+FP +   +L LPGIG  TA
Sbjct: 64  LALANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTA 123

Query: 128 AAITAIAFDRKATVVDGNVERVIARIFAVEEPLPNAKP---SLRRLAATLTPDFRPGDYA 184
            A+ +++  +   ++DGNV+RV+AR  A+ E  P  KP    L +L   LTP      Y 
Sbjct: 124 GAVLSLSLGQHHPILDGNVKRVLARHGAI-EGWPGQKPVEERLWQLTEQLTPQQDIQKYN 182

Query: 185 QAMMDLGATICTPRKPKCMLCPWAEYCEARAAGIAETLPRKVAKAEKPTRRGVAYWL--L 242
           QAMMD+GA+ICT  KP C  CP A  C+A+  G     P K  K   P +   + W+  L
Sbjct: 183 QAMMDIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEK---SAWMLVL 239

Query: 243 NPDGSVLLRRRAEEGLLGGMAEVPSTSWGPDLPGEAAVAAQQPLPARWRRLPGLVRHTFT 302
             D  V L +R   G+ GG+   P  S    L  E  + AQ   P +   L G  RHTF+
Sbjct: 240 FKDNQVFLAKRPPAGIWGGLWCFPEFSSEAALNTE--LEAQGYQPTQLEPLIGF-RHTFS 296

Query: 303 HFHLELE 309
           HFHL+++
Sbjct: 297 HFHLDIQ 303