Pairwise Alignments

Query, 365 a.a., Spermidine-binding periplasmic protein SpuE from Azospirillum sp. SherDot2

Subject, 361 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  319 bits (817), Expect = 8e-92
 Identities = 156/344 (45%), Positives = 229/344 (66%), Gaps = 2/344 (0%)

Query: 23  AQAKKPVNIYIWNDYLGETTLADFTKATGAETKVDLYDSLELLEQKVLVGKSGYDVIVPT 82
           AQA   V IY W+ Y+   TL +FT  TG +T+ DLYDS E+L+ K++ G SGYDV+ P+
Sbjct: 19  AQAADTVRIYNWSSYIAPDTLQNFTTQTGHQTQYDLYDSNEVLDAKLMAGHSGYDVVFPS 78

Query: 83  AEPTLSRLIQAKVVGPLDKSKIPNYKNLDPKVLKLLENSDPGNKYAVPYLGGTVGIAIIP 142
               ++R I A  + PLD+SK+PN+ NL+P ++K+LE +DPGN+Y  PYL G+ GI    
Sbjct: 79  NH-FMARQITAGALKPLDRSKLPNWHNLNPTLMKVLEANDPGNRYGFPYLWGSTGIGYNV 137

Query: 143 EKIKAVAPDVALDSWDLIFKPEVAKKVAACGITVMDSAIDVIPSVLNYLGLDPNSEKKED 202
            K+KAV  DV +DSWD++FKPE  KK+A CG+ ++D+  +++P  LNYLGL  +S+ K D
Sbjct: 138 AKVKAVLGDVPIDSWDIVFKPENMKKLARCGVAMLDNGPEILPIALNYLGLPHHSKDKAD 197

Query: 203 LDKVEKTLMAVRPYIKRFVTGENINILAGGDACVVMAYNGDAIQGAARAAEA-KSAKVEY 261
            +K +  L+ VRPY+  F   +  + LA GD C+V+ ++GD +Q AARA EA    ++ Y
Sbjct: 198 YEKAQALLLKVRPYVSYFHNSKYTSDLATGDVCLVVGFSGDVMQAAARANEAGNGQQIAY 257

Query: 262 ITPKEGVQVWWDTLAVPADAPNKDGAYEYINFVLDPANMANISNKVSYANAVPASLATVA 321
             PKEG  +W+D +A+PADAPN+   YE++N++LDP  MA ISN V YAN   A+   V 
Sbjct: 258 AIPKEGSPMWFDMVAMPADAPNEGAGYEFLNYLLDPKVMAGISNHVHYANGNTAAEGLVD 317

Query: 322 DDIKSNPGIFLPADSKLKLFSLKQIKQATDRARTRVWTKVKTGK 365
             I+++P ++ P     KLF L+ +    DR RTRVW+++K+G+
Sbjct: 318 KAIRNDPMVYPPDSVMKKLFVLEAMPLENDRLRTRVWSRIKSGQ 361