Pairwise Alignments

Query, 365 a.a., Spermidine-binding periplasmic protein SpuE from Azospirillum sp. SherDot2

Subject, 364 a.a., polyamine ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  302 bits (774), Expect = 8e-87
 Identities = 160/359 (44%), Positives = 226/359 (62%), Gaps = 6/359 (1%)

Query: 8   LIGAVAAIAIAGPAMAQAKKPVNIYIWNDYLGETTLADFTKATGAETKVDLYDSLELLEQ 67
           L+GA   +A++     QA   V+IY W+DY+G  TLA+F KA+G +   D++DS E LE 
Sbjct: 11  LVGAGITLAVS----VQAAPTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEG 66

Query: 68  KVLVGKSGYDVIVPTAEPTLSRLIQAKVVGPLDKSKIPNYKNLDPKVLKLLENSDPGNKY 127
           K+L G++GYDV+VP+    L + I+A     LDKS + +Y NLDP +LK LE +DPGN+Y
Sbjct: 67  KLLAGRTGYDVVVPSNH-FLGKQIKAGAFQKLDKSLLTHYANLDPALLKRLEKNDPGNQY 125

Query: 128 AVPYLGGTVGIAIIPEKIKAVAPDVALDSWDLIFKPEVAKKVAACGITVMDSAIDVIPSV 187
           AVPYL GT GI    +K+K V     +DSW ++F+PE  KK+A CG++ MDSA +++P+V
Sbjct: 126 AVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSADEMLPAV 185

Query: 188 LNYLGLDPNSEKKEDLDKVEKTLMAVRPYIKRFVTGENINILAGGDACVVMAYNGDAIQG 247
           LNY+GLDPNS   ED  K E  L+ VRPY+  F + + I+ LA G+ CV   ++GD  Q 
Sbjct: 186 LNYMGLDPNSTNPEDYKKAEAKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQA 245

Query: 248 AARAAEA-KSAKVEYITPKEGVQVWWDTLAVPADAPNKDGAYEYINFVLDPANMANISNK 306
            ARAAEA K   + Y  PKEG  +W+D LA+P DA N   A+ +IN++L P  +A +S+ 
Sbjct: 246 KARAAEAGKGVNIAYAIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDY 305

Query: 307 VSYANAVPASLATVADDIKSNPGIFLPADSKLKLFSLKQIKQATDRARTRVWTKVKTGK 365
           V YAN  P S   +   I+++  ++ P     + F   ++     R  TR WTKVKTGK
Sbjct: 306 VGYANPNPGSDKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTGK 364