Pairwise Alignments

Query, 1007 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 1282 a.a., diguanylate phosphodiesterase from Pseudomonas fluorescens FW300-N2E3

 Score =  364 bits (935), Expect = e-104
 Identities = 243/722 (33%), Positives = 373/722 (51%), Gaps = 36/722 (4%)

Query: 283  QSERDLWREKERARVTLLSIGDGLIATDTAGRVSLMNPVAERL----------TGWTLGE 332
            ++   L   ++R R+   SI D + +TD+   ++ ++P    +           GW    
Sbjct: 576  EASESLRDSEQRYRMLAESISDVIFSTDSKLSLNYVSPSVNAVLGYDVDWIFQNGWQSTI 635

Query: 333  AAGRPVTEVFDIENAETGQRVPVPVEQVLKNGEMVGLANHTVLVACDGTRSHIADMASPI 392
            A  + +T ++ + +    + +  P +      ++         +  DG +  I      +
Sbjct: 636  ANPQQLTGIYSLMD-RVSKALDKPEQLAQLRSQVQTQLFLFDCLRADGRKIPIELRLVLV 694

Query: 393  RDRDGTLHGVVMVFQDVTETYASREALKDSLSLNTGILESAACGIIATTLDGVVRVFNRE 452
             D  G   GV+ V +D+++    R A KD L +   + E +   I+ T   G +   N  
Sbjct: 695  WDEHGAFEGVLGVGRDISQ---QRRAEKD-LRMAATVFEHSTSAILITDPAGYIVQANEA 750

Query: 453  AERIFGYPAAEMIGSADLPRLYDPDELRAHADGLSIELDRPVKADFAALVAHTRCSGRPE 512
              R+ GY  A+++    LP +   D+          + +  ++     L  H+   G   
Sbjct: 751  FSRVSGYEVAQVLDQ--LPNMLTVDD----------QQEAHLRYVLKQLHQHSTWEGEV- 797

Query: 513  PGEWTGVRRNGARISISTVTSVLRDSGGAVRGYLTVAMDVTERKQAERQIENLAFYDPLT 572
               W   RRNG         + + D  G +  Y+    D++ERK +E++I  LA+YD LT
Sbjct: 798  ---WLK-RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALT 853

Query: 573  NLPNRRLLMEHLDVHLRAARLGARCGALMFLDLDDFKGLNDARGHMVGDMLLRELAARLN 632
            +LPNR L  + L   L++A        LMFLDLD FK +ND+ GH  GD +L+E+A RL 
Sbjct: 854  HLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLL 913

Query: 633  ATLRKGDLVCRLSGDEFVILLPDIGTTLEEATAIASKVAEKLRLAVAQPFQLDCCEHSIF 692
            A +   D V R+ GDEF +LL    +  E A   A  VAE++  ++ +PF L+  E  + 
Sbjct: 914  ACVDDDDTVARMGGDEFTLLLQPRASR-EIALNRAIHVAEQILASLVKPFVLEGREFFVT 972

Query: 693  ASIGLTVFPKTPDESVEDLLKQADTAMYAAKDGGRNTIRDYDPAMLIEAQARLLLLQDLR 752
            ASIG+ + P+  +E +  L+K ADTAMY AK+ G+N  + Y   M   A  RL L  DLR
Sbjct: 973  ASIGIALSPQDGNE-LSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLR 1031

Query: 753  KAVDAGEFTLFLQPQTSADGT-LVAAEALIRWQHPQRGFVAPGAFIAEAEESGLILPIGD 811
             A++  EF L+ QPQ S DG  L  AEAL+RW+HP+RG V PG FI   EE GL++ +GD
Sbjct: 1032 HALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGD 1091

Query: 812  WVLMEACHVLRRLADAGSDC-HLSVNISPRQFRQPNFCAGVIAALRATRTDPRRLMLEIT 870
            WV+ EAC  L+    A      +SVNIS RQF        +   L+ T   P  L LE+T
Sbjct: 1092 WVISEACRQLKTWHQAKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPPACLELELT 1151

Query: 871  EGIAVGDCADTAAKMSELAALGISFSLDDFGTGFSSLSYLKRLPVREIKIDRSFVQDVDS 930
            E I + + ++    ++ L  LG+S ++DDFGTG+SSL+YLK+ P+  +KIDR+FV  + S
Sbjct: 1152 ESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPS 1211

Query: 931  NSHNAVLVETMLSIASRLGLKVVAEGVETAAERDFLKDRGCAVFQGYHFDRPMSVEDFIA 990
               +A +   ++++A  L L V+AEGVET  + DFL++ GC   QGY F RPM    F A
Sbjct: 1212 GEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAARFEA 1271

Query: 991  KY 992
            ++
Sbjct: 1272 QF 1273



 Score = 44.7 bits (104), Expect = 4e-08
 Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 5/175 (2%)

Query: 393 RDRDGTLHGVVMVFQDVTETYASREALKDSLSLNTGILESAACGIIATTLDGVVRVFNRE 452
           RD+   +  ++ V +D+T+   + E+L+DS      + ES +  I +T     +   +  
Sbjct: 555 RDKHDQVTRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVIFSTDSKLSLNYVSPS 614

Query: 453 AERIFGYPAAEMIGSADLPRLYDPDELRAHADGLSIELDRPVKA-DFAALVAHTRCSGRP 511
              + GY    +  +     + +P +L     G+   +DR  KA D    +A  R   + 
Sbjct: 615 VNAVLGYDVDWIFQNGWQSTIANPQQL----TGIYSLMDRVSKALDKPEQLAQLRSQVQT 670

Query: 512 EPGEWTGVRRNGARISISTVTSVLRDSGGAVRGYLTVAMDVTERKQAERQIENLA 566
           +   +  +R +G +I I     ++ D  GA  G L V  D++++++AE+ +   A
Sbjct: 671 QLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRMAA 725