Pairwise Alignments

Query, 1007 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 894 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  399 bits (1024), Expect = e-115
 Identities = 256/601 (42%), Positives = 334/601 (55%), Gaps = 21/601 (3%)

Query: 404  MVFQDVTETYASREALKDSLSLNTGILESAACGIIATTLDGVVRVFNREAERIFGYPAAE 463
            + F+ +     +R A+  S +     LES   G +    +  V  +N + E IF  P   
Sbjct: 305  LAFRYLDRLSQARVAIAQSKATLDQALESMVSGFLLLDKNNCVVQWNSQFEVIF--PWLR 362

Query: 464  MIGSADLP-RLYDPDELRAHADGLSIELDRPVKADFAALVAHTRCSGR-PEPGEWTGVRR 521
             I +  LP R    + ++ H   L+ E       + A  V       + P+      V  
Sbjct: 363  GIVAPRLPFRAVIEETVKHHHPRLADE-------EHARWVEQRLLRQKQPQNEPHEQVFS 415

Query: 522  NGARISISTVTSVLRDSGGAVRGYLTVAMDVTERKQAERQIENLAFYDPLTNLPNRRLLM 581
            NG  I I   T      GG V  Y     DVT  ++A  +IENLAFYDPLTNLPNRRLLM
Sbjct: 416  NGRTIQI---TERPTPDGGLVISY----HDVTALRRASAEIENLAFYDPLTNLPNRRLLM 468

Query: 582  EHLDVHLRAARLGARCGALMFLDLDDFKGLNDARGHMVGDMLLRELAARLNATLRKGDLV 641
            + +   + ++    + GAL+FLDLD FK LND RGH VGDMLLR++A RL   +R+ D V
Sbjct: 469  DRMQQAIASSARSGQYGALLFLDLDHFKTLNDTRGHEVGDMLLRQVAQRLKTCVRREDTV 528

Query: 642  CRLSGDEFVILLPDIGTTLEEATAIASKVAEKLRLAVAQPFQLDCCEHSIFASIGLTVFP 701
             RL GDEFV++L D+  + EEA A   +V EK+   +  P+ L    H    SIG T+  
Sbjct: 529  ARLGGDEFVVMLSDLSASSEEAGAHVRRVGEKILRKLNVPYTLGGHAHHSTPSIGATLMG 588

Query: 702  KTPDESVEDLLKQADTAMYAAKDGGRNTIRDYDPAMLIEAQARLLLLQDLRKAVDAGEFT 761
                 SV DLLKQAD AMY  K  GRN +  +DP M I    R  L  DL+ A+ A +F 
Sbjct: 589  GAIQSSV-DLLKQADIAMYQVKSQGRNALCFFDPQMQISISLRAQLEADLQAALTARQFV 647

Query: 762  LFLQPQTSADGTLVAAEALIRWQHPQRGFVAPGAFIAEAEESGLILPIGDWVLMEACHVL 821
            L  QPQ   DG +V AE LIRWQHP+RG VAPGAFI  AEES LI+P+G WVL  AC  L
Sbjct: 648  LHYQPQFHLDGRMVGAEGLIRWQHPERGLVAPGAFIGVAEESELIVPMGHWVLRTACEQL 707

Query: 822  RRLADAGSDCHL--SVNISPRQFRQPNFCAGVIAALRATRTDPRRLMLEITEGIAVGDCA 879
                      HL  SVN+S RQFRQ +F A V+  LR T   P  L LE+TE + + +  
Sbjct: 708  AAWQGNPRLQHLQLSVNVSARQFRQRDFVARVVEVLRETGARPHLLKLELTESLVLDNVD 767

Query: 880  DTAAKMSELAALGISFSLDDFGTGFSSLSYLKRLPVREIKIDRSFVQDVDSNSHNAVLVE 939
            DT AK+  L   G+ FS+DDFGTG+SSL+YL RLP+ ++KID+SFV ++     + V+V+
Sbjct: 768  DTIAKIGTLKTKGVRFSVDDFGTGYSSLAYLTRLPLDQLKIDQSFVHNLGVRHTDDVIVQ 827

Query: 940  TMLSIASRLGLKVVAEGVETAAERDFLKDRGCAVFQGYHFDRPMSVEDFIAKYMKKTEIA 999
            T+L +A  L L V+AEGVET A++  L   GC  FQGY   RP+ V +  A     T  A
Sbjct: 828  TILGMARNLELDVIAEGVETEAQKKLLAQYGCTYFQGYLMGRPVPVAELEALLEPVTTTA 887

Query: 1000 E 1000
            E
Sbjct: 888  E 888